Evidence map›Paper›PMID 24129635›Full record

ArticleCancer prevention research (Philadelphia, Pa.)2013

Black raspberries protectively regulate methylation of Wnt pathway genes in precancerous colon tissue.

Li-Shu Wang, Chieh-Ti Kuo, Tim H-M Huang, Martha Yearsley, Kiyoko Oshima, Gary D Stoner, Jianhua Yu, John F Lechner, Yi-Wen Huang

Open access · bronzeAbstract read
In one paragraph

Article in Cancer prevention research (Philadelphia, Pa.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 53 citations in OpenAlex.

  1. Review
  2. Review
  3. Frontiers in oncology · 2024
    Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. International journal of molecular sciences · 2020
    Article
  9. Article
  10. Article
  11. Chemopreventive and Therapeutic Efficacy ofMolecules (Basel, Switzerland) · 2020
    Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Protective Role of Dietary Berries in Cancer.Antioxidants (Basel, Switzerland) · 2016
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Li-Shu WangDivision of Hematology and Oncology, Department of Medicine, Medical College of Wisconsin, 8701 Watertown Plank Rd, TBRC, Room C4930, Milwaukee, WI 53226. liswang@mcw.edu.
Chieh-Ti Kuo
Tim H-M Huang
Martha Yearsley
Kiyoko Oshima
Gary D Stoner
Jianhua Yu
John F Lechner
Yi-Wen Huang
Medical College of Wisconsin · USThe University of Texas Health Science Center at San Antonio · US

Funding

Predicting Drug Resistance in Cancer Genomes by DMA Methylation ProfilingU54CA113001 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI HUANG, TIM H.-M. · 2004 to 2014
$16.1M
Prevention of Esophageal Cancer with BerriesR01CA103180 · NCI · OHIO STATE UNIVERSITY · PI STONER, GARY · 2003 to 2013
$4.0M
DNA Hypermethylation in Breast CancerR01CA069065 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI HUANG, TIM H.-M. · 2002 to 2011
$2.4M
Enhancing NK Cell Activity by Dietary Diphyllin Lignans for Cancer PreventionR01CA185301 · NCI · OHIO STATE UNIVERSITY · PI CALIGIURI, MICHAEL A, YU, JIANHUA · 2015 to 2019
$1.8M
Epigenomics of Bisphenol A Exposure and Disease RiskR01ES017594 · NIEHS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI HUANG, TIM H.-M. · 2009 to 2013
$1.8M
Combinational Environmental Chemicals Altering Susceptibility for Mammary CancerU01ES019482 · NIEHS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI HUANG, TIM H.-M., LAMARTINIERE, CORAL · 2010 to 2013
$1.7M
Tissue and Pathology CoreP50CA134254 · NCI · WASHINGTON UNIVERSITY · PI POLLOCK, PAMELA M, POWELL, MATTHEW A · 2009 to 2011
$1.7M
Mechanisms of tumor suppressor gene reactivation in colon cancer by berriesR01CA148818 · NCI · OHIO STATE UNIVERSITY · PI WANG, LI-SHU · 2010 to 2014
$1.5M
Elucidate and Modulate TGF-b Signaling in NK Cells for Glioma TreatmentR01CA155521 · NCI · OHIO STATE UNIVERSITY · PI YU, JIANHUA · 2012 to 2014
$921k
NCI NIH HHS P50 CA134254NCI NIH HHS R01 CA069065NCI NIH HHS R01 CA103180NCI NIH HHS R01 CA148818NCI NIH HHS R01 CA155521NCI NIH HHS R01 CA185301NCI NIH HHS U54 CA113001NIEHS NIH HHS R01 ES017594NIEHS NIH HHS U01 ES019482
6 · The paper itself

Abstract

Ulcerative colitis is frequently an intermediate step to colon cancer. The interleukin-10 knockout mouse is a genetic model of this progression. We report that knockout mice fed 5% black raspberries (BRB) had significantly less colonic ulceration as compared with knockout mice that consumed the control diet. Dysfunction of the Wnt signaling pathway is a key event in ulcerative colitis-associated colon carcinogenesis. Therefore, we investigated the effects of BRBs on the Wnt pathway and found that the BRB-fed knockout mice exhibited a significantly lower level of β-catenin nuclear translocation. We followed-up this observation by evaluating the effect of BRBs on selected Wnt pathway antagonists. The mRNA expression levels of wif1, sox17, and qki were diminished in the knockout mice, whereas they were expressed at normal levels in knockout mice that were fed BRBs. The lower mRNA expression of these genes in the colon from the knockout mice correlated with hypermethylation of their promoter regions; BRBs decreased their promoter methylation and increased mRNA expression of these genes. This hypomethylation was associated with elevated protein expression of key proteins/enzymes that augment methylation, for example, dnmt3b, hdac1, hdac2, and mbd2 in the knockout mice; in addition, BRBs decreased the protein expression of these proteins/enzymes. The knockout mouse model recapitulates what occurs in human ulcerative colitis. Promoter methylation of CDH1 and SFRP1 was significantly higher in human ulcerative colitis tissues compared with their adjacent normal tissues. In conclusion, our results suggest that BRBs inhibit colonic ulceration and, ultimately, colon cancer partly through inhibiting aberrant epigenetic events that dysregulate Wnt signaling.

Indexed as

DNA MethylationAnimalsColitis, UlcerativeColonDietDNA-Binding ProteinsDNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3BFemaleFruitHistone Deacetylase 1Histone Deacetylase 2HumansImmunoenzyme TechniquesInterleukin-10MiceDNA-Binding ProteinsDNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3BHDAC1 protein, humanHDAC2 protein, humanHistone Deacetylase 1Histone Deacetylase 2Interleukin-10MBD2 protein, humanRNA, Messenger

Identifiers

PMID24129635
PMCPMC3902171
OpenAlexW2159552814

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.