Evidence map›Paper›PMID 24129575›Full record

ArticleThe Journal of biological chemistry2013

Hydrolysis at one of the two nucleotide-binding sites drives the dissociation of ATP-binding cassette nucleotide-binding domain dimers.

Maria E Zoghbi, Guillermo A Altenberg

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Mapping Free Energy Pathways for ATP Hydrolysis in theMolecules (Basel, Switzerland) · 2018
    Article
  6. Article
  7. Comparison of mechanistic transport cycle models of ABC exporters.Biochimica et biophysica acta. Biomembranes · 2018
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Maria E ZoghbiDepartment of Cell Physiology and Molecular Biophysics and Center for Membrane Protein Research, Texas Tech Health Sciences Center, Lubbock, Texas 79430-6551.
Guillermo A AltenbergDepartment of Cell Physiology and Molecular Biophysics and Center for Membrane Protein Research, Texas Tech Health Sciences Center, Lubbock, Texas 79430-6551. Electronic address: g.altenberg@ttuhsc.edu.

Funding

Architecture of the transmembrane pore formed by connexin 43R01GM079629 · NIGMS · TEXAS TECH UNIVERSITY HEALTH SCIS CENTER · PI ALTENBERG, GUILLERMO A · 2007 to 2011
$1.7M
NIGMS NIH HHS 3R01GM079629-03S1NIGMS NIH HHS R01 GM079629NIGMS NIH HHS R01GM79629
6 · The paper itself

Abstract

The functional unit of ATP-binding cassette (ABC) transporters consists of two transmembrane domains and two nucleotide-binding domains (NBDs). ATP binding elicits association of the two NBDs, forming a dimer in a head-to-tail arrangement, with two nucleotides "sandwiched" at the dimer interface. Each of the two nucleotide-binding sites is formed by residues from the two NBDs. We recently found that the prototypical NBD MJ0796 from Methanocaldococcus jannaschii dimerizes in response to ATP binding and dissociates completely following ATP hydrolysis. However, it is still unknown whether dissociation of NBD dimers follows ATP hydrolysis at one or both nucleotide-binding sites. Here, we used luminescence resonance energy transfer to study heterodimers formed by one active (donor-labeled) and one catalytically defective (acceptor-labeled) NBD. Rapid mixing experiments in a stop-flow chamber showed that NBD heterodimers with one functional and one inactive site dissociated at a rate indistinguishable from that of dimers with two hydrolysis-competent sites. Comparison of the rates of NBD dimer dissociation and ATP hydrolysis indicated that dissociation followed hydrolysis of one ATP. We conclude that ATP hydrolysis at one nucleotide-binding site drives NBD dimer dissociation.

Indexed as

Adenosine TriphosphateArchaeal ProteinsATP-Binding Cassette TransportersHydrolysisMethanocaldococcusProtein MultimerizationProtein Structure, TertiaryAdenosine TriphosphateArchaeal ProteinsATP-Binding Cassette TransportersABC TransporterATPasesCFTRFluorescenceKineticsLRETLuminescence Resonance Energy TransferMultidrug TransportersThermophile

Identifiers

PMID24129575
PMCPMC3837166

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.