Evidence map›Paper›PMID 24129492›Full record

ArticleRNA (New York, N.Y.)2013

Visualization of the joining of ribosomal subunits reveals the presence of 80S ribosomes in the nucleus.

Khalid Al-Jubran, Jikai Wen, Akilu Abdullahi, Subhendu Roy Chaudhury, Min Li, Preethi Ramanathan, Annunziata Matina, Sandip De, Kim Piechocki, Kushal Nivriti Rugjee and 1 more

Abstract read
In one paragraph

Article in RNA (New York, N.Y.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Has translation in the nucleus found its purpose?Nature reviews. Molecular cell biology · 2024
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Local translation in nuclear condensate amyloid bodies.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  11. Article
  12. Visualisation of ribosomes inBiology open · 2020
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Khalid Al-Jubran
Jikai Wen
Akilu Abdullahi
Subhendu Roy Chaudhury
Min Li
Preethi Ramanathan
Annunziata Matina
Sandip De
Kim Piechocki
Kushal Nivriti Rugjee
Saverio Brogna

Funding

Wellcome Trust
6 · The paper itself

Abstract

In eukaryotes the 40S and 60S ribosomal subunits are assembled in the nucleolus, but there appear to be mechanisms preventing mRNA binding, 80S formation, and initiation of translation in the nucleus. To visualize association between ribosomal subunits, we tagged pairs of Drosophila ribosomal proteins (RPs) located in different subunits with mutually complementing halves of fluorescent proteins. Pairs of tagged RPs expected to interact, or be adjacent in the 80S structure, showed strong fluorescence, while pairs that were not in close proximity did not. Moreover, the complementation signal is found in ribosomal fractions and it was enhanced by translation elongation inhibitors and reduced by initiation inhibitors. Our technique achieved 80S visualization both in cultured cells and in fly tissues in vivo. Notably, while the main 80S signal was in the cytoplasm, clear signals were also seen in the nucleolus and at other nuclear sites. Furthermore, we detected rapid puromycin incorporation in the nucleolus and at transcription sites, providing an independent indication of functional 80S in the nucleolus and 80S association with nascent transcripts.

Indexed as

AnimalsBacterial ProteinsCell LineCell NucleolusCell NucleusDrosophila melanogasterDrosophila ProteinsLuminescent ProteinsMicroscopy, FluorescencePeptidyl TransferasesPolytene ChromosomesProtein BindingRecombinant Fusion ProteinsRibosomal ProteinsRibosomesRNA, MessengerBacterial ProteinsDrosophila ProteinsLuminescent ProteinsPeptidyl TransferasesRecombinant Fusion ProteinsRibosomal ProteinsRNA, Messengeryellow fluorescent protein, Bacterianascent transcriptsnuclear ribosomal subunitsribosomal subunits joiningtranslation

Identifiers

PMID24129492
PMCPMC3884666

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.