Evidence map›Paper›PMID 24129440›Full record

ArticleDalton transactions (Cambridge, England : 2003)2014

EXAFS simulation refinement based on broken-symmetry DFT geometries for the Mn(IV)-Fe(III) center of class I RNR from Chlamydia trachomatis.

Sandra Luber, Sophie Leung, Carmen Herrmann, Wenge Han Du, Louis Noodleman, Victor S Batista

Abstract read
In one paragraph

Article in Dalton transactions (Cambridge, England : 2003), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 86% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 3 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Sandra LuberDepartment of Chemistry, Yale University, P.O. Box 208107, New Haven, CT 06520, USA. victor.batista@yale.edu.
Sophie Leung
Carmen Herrmann
Wenge Han Du
Louis Noodleman
Victor S Batista
Yale University · USScripps Research Institute · US

Funding

ELECTRONIC STRUCTURE OF FE-OXO AND MN-OXO COMPLEXESR01GM043278 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI NOODLEMAN, LOUIS · 1991 to 2010
$2.7M
NIGMS NIH HHS GM043278NIGMS NIH HHS R01 GM043278
6 · The paper itself

Abstract

Ribonucleotide reductases (RNRs) catalyze the reduction of ribonucleotides into deoxyribonucleotides necessary for DNA biosynthesis. Unlike the conventional class Ia RNRs which use a diiron cofactor in their subunit R2, the active site of the RNR-R2 from Chlamydia trachomatis (Ct) contains a Mn/Fe cofactor. The detailed structure of the Mn/Fe core has yet to be established. In this paper we evaluate six different structural models of the Ct RNR active site in the Mn(iv)/Fe(iii) state by using Mössbauer parameter calculations and simulations of Mn/Fe extended X-ray absorption fine structure (EXAFS) spectroscopy, and we identify a structure similar to a previously proposed DFT-optimized model that shows quantitative agreement with both EXAFS and Mössbauer spectroscopic data.

Indexed as

IronManganeseQuantum TheoryX-Ray Absorption SpectroscopyCatalytic DomainChlamydia trachomatisRibonucleotide ReductasesIronManganeseRibonucleotide Reductases

Identifiers

PMID24129440
PMCPMC3855085
OpenAlexW2157076054

What OpenQuestion holds

Textmetadata
LicenceTDM
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.