Evidence map›Paper›PMID 24128935›Full record

ArticlePharmacogenetics and genomics2013

Impact of TCF7L2 single nucleotide polymorphisms on hydrochlorothiazide-induced diabetes.

Jason H Karnes, Yan Gong, Michael A Pacanowski, Caitrin W McDonough, Meghan J Arwood, Taimour Y Langaee, Carl J Pepine, Julie A Johnson, Rhonda M Cooper-Dehoff

Open access · greenAbstract read
In one paragraph

Article in Pharmacogenetics and genomics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 16 citations in OpenAlex.

  1. Genome Wide Association Study Identifies theJournal of the American Heart Association · 2018
    Pooled it
  2. Trial
  3. Article
  4. Article
  5. Article
  6. Pharmacogenomics of hypertension and heart disease.Current hypertension reports · 2015
    Review
  7. Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Jason H KarnesaDepartment of Medicine, Division of Clinical Pharmacology, Vanderbilt University, Nashville, Tennessee bDepartment of Pharmacotherapy and Translational Research cDepartment of Pharmacotherapy and Translational Research, Center for Pharmacogenomics dDepartment of Medicine, Division of Cardiovascular Medicine, University of Florida, Gainesville, Florida eOffice of Clinical Pharmacology, Food and Drug Administration, Silver Spring, Maryland, USA.
Yan Gong
Michael A Pacanowski
Caitrin W McDonough
Meghan J Arwood
Taimour Y Langaee
Carl J Pepine
Julie A Johnson
Rhonda M Cooper-Dehoff
University of Florida · USUnited States Food and Drug Administration · USVanderbilt University · US

Funding

Pharmacogenomic Evaluation of Antihypertensive ResponsesU01GM074492 · NIGMS · UNIVERSITY OF FLORIDA · PI JOHNSON, JULIE A. · 2005 to 2014
$20.7M
CLINICAL PHARMACOLOGY TRAINING PROGRAMT32GM007569 · NIGMS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Bjorn C Knollmann · 1985 to 2026
$12.4M
Hypertension PharmacogeneticsR01HL074730 · NHLBI · UNIVERSITY OF FLORIDA · PI JOHNSON, JULIE A. · 2003 to 2006
$3.4M
UF Clinical and Translational Science AwardKL2RR029888 · NCRR · UNIVERSITY OF FLORIDA · PI NELSON, DAVID R · 2009 to 2011
$1.8M
Metabolic Effects of Antihypertensive DrugsK23HL086558 · NHLBI · UNIVERSITY OF FLORIDA · PI COOPER-DEHOFF, RHONDA M · 2007 to 2011
$672k
NCRR NIH HHS KL2 RR029888NCRR NIH HHS TL1RR029888NHLBI NIH HHS HL086558NHLBI NIH HHS K23 HL086558NHLBI NIH HHS R01 HL074730NHLBI NIH HHS R01HL74730NIGMS NIH HHS T32 GM007569NIGMS NIH HHS T32GM007569NIGMS NIH HHS U01 GM074492
6 · The paper itself

Abstract

objectiveThiazide diuretics have been associated with increased risk for new onset diabetes (NOD), but pharmacogenetic markers of thiazide-induced NOD are not well studied. Single nucleotide polymorphisms (SNPs) in the transcription factor 7-like 2 gene (TCF7L2) represent the strongest and most reproducible genetic associations with diabetes. We investigated the association of tag SNPs in TCF7L2 with thiazide-induced NOD.

methodsWe identified cases that developed NOD and age, sex, and race/ethnicity-matched controls from the INternational VErapamil SR-Trandolapril STudy (INVEST). INVEST compared cardiovascular outcomes between two antihypertensive treatment strategies in ethnically diverse patients with hypertension and coronary artery disease. We genotyped 101 TCF7L2 tag SNPs and used logistic regression to test for pharmacogenetic (SNP×hydrochlorothiazide treatment) interactions. Permuted interaction P values were corrected with the PACT test and adjusted for diabetes-related variables.

resultsIn INVEST whites, we observed three TCF7L2 SNPs with significant SNP×treatment interactions for NOD. The strongest pharmacogenetic interaction was observed for rs7917983 [synergy index 3.37 (95% CI 1.72-6.59), P=5.0×10, PACT=0.03], which was associated with increased NOD risk in hydrochlorothiazide-treated patients [odds ratio 1.53 (1.04-2.25), P=0.03] and decreased NOD risk in non hydrochlorothiazide-treated patients [odds ratio 0.48 (0.27-0.86), P=0.02]. The TCF7L2 SNP rs4506565, previously associated with diabetes, showed a similar, significant pharmacogenetic association.

conclusionOur results suggest that hydrochlorothiazide treatment is an environmental risk factor that increases diabetes risk beyond that attributed to TCF7L2 variation in white, hypertensive patients. Further study and replication of our results is needed to confirm pharmacogenetic influences of TCF7L2 SNPs on thiazide-induced NOD.

Indexed as

Polymorphism, Single NucleotideAgedAntihypertensive AgentsBlack or African AmericanCase-Control StudiesCoronary Artery DiseaseDiabetes Mellitus, Type 2FemaleGenetic Association StudiesGenetic MarkersGenetic Predisposition to DiseaseGenetic VariationHumansHydrochlorothiazideHypertensionMaleAntihypertensive AgentsGenetic MarkersHydrochlorothiazideTCF7L2 protein, humanTranscription Factor 7-Like 2 Protein

Identifiers

PMID24128935
PMCPMC3893755
OpenAlexW2027496500

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.