Evidence map›Paper›PMID 24126580›Full record

ArticleAntimicrobial agents and chemotherapy2014

Optimization of pyrrolamides as mycobacterial GyrB ATPase inhibitors: structure-activity relationship and in vivo efficacy in a mouse model of tuberculosis.

Shahul Hameed P, Suresh Solapure, Kakoli Mukherjee, Vrinda Nandi, David Waterson, Radha Shandil, Meenakshi Balganesh, Vasan K Sambandamurthy, Anand Kumar Raichurkar, Abhijeet Deshpande and 21 more

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 46 citations in OpenAlex.

  1. Discovery of Putative GyrB Inhibitors againstCurrent medicinal chemistry · 2026
    Article
  2. Stereoselective Synthesis and Antimicrobial Studies ofPharmaceuticals (Basel, Switzerland) · 2025
    Article
  3. Structural Aspects ofACS medicinal chemistry letters · 2024
    Article
  4. Review
  5. Article
  6. Revealing the Interaction Mechanism betweenInternational journal of molecular sciences · 2024
    Article
  7. Potential therapeutic targets fromRSC medicinal chemistry · 2022
    Review
  8. Article
  9. Article
  10. Antimicrobial agents and chemotherapy · 2018
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

31 authors at 3 institutions in 3 countries.

Shahul Hameed PAstraZeneca India Pvt Ltd., Hebbal, Bangalore, India.
Suresh Solapure
Kakoli Mukherjee
Vrinda Nandi
David Waterson
Radha Shandil
Meenakshi Balganesh
Vasan K Sambandamurthy
Anand Kumar Raichurkar
Abhijeet Deshpande
Anirban Ghosh
Disha Awasthy
Gajanan Shanbhag
Gulebahar Sheikh
Helen McMiken
Jayashree Puttur
Jitendar Reddy
Jim Werngren
Jon Read
Mahesh Kumar
Manjunatha R
Murugan Chinnapattu
Prashanti Madhavapeddi
Praveena Manjrekar
Reetobrata Basu
Sheshagiri Gaonkar
Sreevalli Sharma
Sven Hoffner
Vaishali Humnabadkar
Venkita Subbulakshmi
Vijender Panduga
AstraZeneca (United Kingdom) · GBAstraZeneca (India) · INSwedish Institute · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Moxifloxacin has shown excellent activity against drug-sensitive as well as drug-resistant tuberculosis (TB), thus confirming DNA gyrase as a clinically validated target for discovering novel anti-TB agents. We have identified novel inhibitors in the pyrrolamide class which kill Mycobacterium tuberculosis through inhibition of ATPase activity catalyzed by the GyrB domain of DNA gyrase. A homology model of the M. tuberculosis H37Rv GyrB domain was used for deciphering the structure-activity relationship and binding interactions of inhibitors with mycobacterial GyrB enzyme. Proposed binding interactions were later confirmed through cocrystal structure studies with the Mycobacterium smegmatis GyrB ATPase domain. The most potent compound in this series inhibited supercoiling activity of DNA gyrase with a 50% inhibitory concentration (IC50) of <5 nM, an MIC of 0.03 μg/ml against M. tuberculosis H37Rv, and an MIC90 of <0.25 μg/ml against 99 drug-resistant clinical isolates of M. tuberculosis. The frequency of isolating spontaneous resistant mutants was ∼10(-6) to 10(-8), and the point mutation mapped to the M. tuberculosis GyrB domain (Ser208 Ala), thus confirming its mode of action. The best compound tested for in vivo efficacy in the mouse model showed a 1.1-log reduction in lung CFU in the acute model and a 0.7-log reduction in the chronic model. This class of GyrB inhibitors could be developed as novel anti-TB agents.

Indexed as

AnimalsAntitubercular AgentsCell LineHumansMiceMycobacterium tuberculosisStructure-Activity RelationshipTuberculosisAntitubercular Agents

Identifiers

PMID24126580
PMCPMC3910769
OpenAlexW2079980984

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.