Evidence map›Paper›PMID 24126056›Full record

ArticleMolecular and cellular biology2013

Histone H3K27 trimethylation inhibits H3 binding and function of SET1-like H3K4 methyltransferase complexes.

Dae-Hwan Kim, Zhanyun Tang, Miho Shimada, Beat Fierz, Brian Houck-Loomis, Maya Bar-Dagen, Seunghee Lee, Soo-Kyung Lee, Tom W Muir, Robert G Roeder and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 69 citations in OpenAlex.

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  14. PRC2 is high maintenance.Genes & development · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Dae-Hwan KimNeuroscience Section, Papé Family Pediatric Research Institute.
Zhanyun Tang
Miho Shimada
Beat Fierz
Brian Houck-Loomis
Maya Bar-Dagen
Seunghee Lee
Soo-Kyung Lee
Tom W Muir
Robert G Roeder
Jae W Lee
Rockefeller University · USOregon Health & Science University · USPohang University of Science and Technology · KR

Funding

Nuclear Receptor Coactivator Functions and MechanismsR01DK071900 · NIDDK · ROCKEFELLER UNIVERSITY · PI ROEDER, ROBERT G · 2005 to 2015
$5.9M
LIM-HD/bHLH Combinatorial Code in MotoneuronsR01NS054941 · NINDS · OREGON HEALTH & SCIENCE UNIVERSITY · PI LEE, SOO-KYUNG · 2006 to 2015
$4.3M
Regulation Code by Nuclear Receptor Coactivator ASC-2R01DK064678 · NIDDK · OREGON HEALTH & SCIENCE UNIVERSITY · PI LEE, JAE W · 2004 to 2016
$4.3M
Cancer Epigenetics Deregulation of Chromatin templated ProcessesRC2CA148354 · NCI · ROCKEFELLER UNIVERSITY · PI ALLIS, CHARLES DAVID, MUIR, TOM · 2009 to 2010
$2.6M
Development and Applications of 'Designer Chromatin'R01GM107047 · NIGMS · PRINCETON UNIVERSITY · PI MUIR, TOM · 2013 to 2016
$1.2M
Gene regulatory networks in spinal cord developmentR56NS054941 · NINDS · OREGON HEALTH & SCIENCE UNIVERSITY · PI LEE, SOO-KYUNG · 2016 to 2016
$539k
NCI NIH HHS CA148354NCI NIH HHS RC2 CA148354NIDDK NIH HHS DK064678NIDDK NIH HHS DK071900NIDDK NIH HHS R01 DK064678NIDDK NIH HHS R01 DK071900NIGMS NIH HHS R01 GM107047NINDS NIH HHS NS054941NINDS NIH HHS R01 NS054941
6 · The paper itself

Abstract

Trimethylated histone H3 lysine 4 (H3K4) and H3K27 generally mark transcriptionally active and repressive chromatins, respectively. In most cell types, these two modifications are mutually exclusive, and this segregation is crucial for the regulation of gene expression. However, how this anticorrelation is achieved has not been fully understood. Here, we show that removal of the H3K27 trimethyl mark facilitates recruitment of SET1-like H3K4 methyltransferase complexes to their target genes by eliciting a novel interaction between histone H3 and two common subunits, WDR5 and RBBP5, of SET1-like complexes. Consistent with this result, H3K27 trimethylation destabilizes interactions of H3 with SET1-like complexes and antagonizes their ability to carry out H3K4 trimethylation of peptide (H3 residues 1 to 36), histone octamer, and mononucleosome substrates. Altogether, our studies reveal that H3K27 trimethylation of histone H3 represses a previously unrecognized interaction between H3 and SET1-like complexes. This provides an important mechanism that directs the anticorrelation between H3K4 and H3K27 trimethylation.

Indexed as

Protein Processing, Post-TranslationalBinding SitesCell SurvivalDNA-Binding ProteinsEpigenesis, GeneticHEK293 CellsHeLa CellsHistone DemethylasesHistone-Lysine N-MethyltransferaseHistonesHumansIntracellular Signaling Peptides and ProteinsMethylationMultienzyme ComplexesNuclear ProteinsProtein BindingDNA-Binding ProteinsHistone DemethylasesHistone-Lysine N-MethyltransferaseHistonesIntracellular Signaling Peptides and ProteinsKDM6A protein, humanMultienzyme ComplexesNuclear ProteinsRBBP5 protein, humanSetd1A protein, humanTretinoinWDR5 protein, human

Identifiers

PMID24126056
PMCPMC3889540
OpenAlexW2134661323

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.