Evidence map›Paper›PMID 24124559›Full record

ArticlePloS one2013

A novel large in-frame deletion within the CACNA1F gene associates with a cone-rod dystrophy 3-like phenotype.

Jan Hauke, Andrea Schild, Antje Neugebauer, Alexandra Lappa, Julia Fricke, Sascha Fauser, Stefanie Rösler, Andrea Pannes, Dirk Zarrinnam, Janine Altmüller and 5 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 36 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Review
  5. Mouse all-cone retina models of Cav1.4 synaptopathy.Frontiers in molecular neuroscience · 2023
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Sensing through Non-Sensing Ocular Ion Channels.International journal of molecular sciences · 2020
    Review
  11. Review
  12. Draft Genome of the European Mouflon (Frontiers in genetics · 2020
    Article
  13. αThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2018
    Article
  14. Article
  15. Article
  16. Channeling Vision: CaBioMed research international · 2018
    Review
  17. Trio-based exome sequencing arrests de novo mutations in early-onset high myopia.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Jan HaukeInstitute of Human Genetics, University of Cologne, Cologne, Germany ; Center for Molecular Medicine Cologne (CMMC), University of Cologne, Cologne, Germany ; Center of Familial Breast and Ovarian Cancer, University Hospital of Cologne, Cologne, Germany.
Andrea Schild
Antje Neugebauer
Alexandra Lappa
Julia Fricke
Sascha Fauser
Stefanie Rösler
Andrea Pannes
Dirk Zarrinnam
Janine Altmüller
Susanne Motameny
Gudrun Nürnberg
Peter Nürnberg
Eric Hahnen
Bodo B Beck
University of Cologne · DECologne Excellence Cluster on Cellular Stress Responses in Aging Associated Diseases · DEUniversity Hospital Cologne · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cone-rod dystrophies (CORDs) represent a heterogeneous group of monogenic diseases leading to early impairment of vision. The majority of CORD entities show autosomal modes of inheritance and X-linked traits are comparably rare. So far, three X-chromosomal entities were reported (CORDX1, -X2 and -X3). In this study, we analysed a large family of German origin with solely affected males over three generations showing a CORDX-like phenotype. Due to the heterogeneity of cone-rod dystrophies, we performed a combined linkage and X-exome sequencing approach and identified a novel large intragenic in-frame deletion encompassing exons 18 to 26 within the CACNA1F gene. CACNA1F is described causative for CORDX3 in a single family originating from Finland and alterations in this gene have not yet been reported in other CORDX pedigrees. Our data independently confirm CACNA1F as the causative gene for CORDX3-like phenotypes and detailed clinical characterization of the family expands the knowledge about the phenotypic spectrum of deleterious CACNA1F alterations.

Indexed as

Genetic Association StudiesMutationPhenotypeAdolescentAdultAgedCalcium Channels, L-TypeChildChild, PreschoolDNA Mutational AnalysisExomeGenetic Diseases, X-LinkedGenetic LinkageHumansMaleMiddle AgedCACNA1F protein, humanCalcium Channels, L-Type

Identifiers

PMID24124559
PMCPMC3790679
OpenAlexW2007840304

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.