ReviewGenomics & informatics2013
Bioprospecting potential of the soil metagenome: novel enzymes and bioactivities.
Review in Genomics & informatics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
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Who cites it
20 citing papers in PubMed.
- Production, optimization and characterization of esterase isolated from a new endophytic Trichoderma afroharzianum strain AUMC 16,433 and its applications in dye decolorization.Microbial cell factories · 2025Article
- Bioprospection of the bacterial β-myrcene-biotransforming trait in the rhizosphere.Applied microbiology and biotechnology · 2023Article
- Review
- Climatic Zone and Soil Properties Determine the Biodiversity of the Soil Bacterial Communities Associated to Native Plants from Desert Areas of North-Central Algeria.Microorganisms · 2021Article
- Two-step functional screen on multiple proteinaceous substrates reveals temperature-robust proteases with a broad-substrate range.Applied microbiology and biotechnology · 2021Article
- In silico analysis of phylogeny, structure, and function of arsenite oxidase from unculturable microbiome of arsenic contaminated soil.Journal, genetic engineering & biotechnology · 2021Article
- Rhizosphere Microbiome of Arid Land Medicinal Plants and Extra Cellular Enzymes Contribute to Their Abundance.Microorganisms · 2020Article
- Crystal structure of PMGL2 esterase from the hormone-sensitive lipase family with GCSAG motif around the catalytic serine.PloS one · 2020Article
- Recovery and functional validation of hidden soil enzymes in metagenomic libraries.MicrobiologyOpen · 2019Article
- Applications of the Soil, Plant and Rumen Microbiomes in Pastoral Agriculture.Frontiers in nutrition · 2019Review
- Genomic and functional techniques to mine the microbiome for novel antimicrobials and antimicrobial resistance genes.Annals of the New York Academy of Sciences · 2017Review
- Metagenomic discovery of novel enzymes and biosurfactants in a slaughterhouse biofilm microbial community.Scientific reports · 2016Article
- Gene-specific amplicons from metagenomes as an alternative to directed evolution for enzyme screening: a case study using phenylacetaldehyde reductases.FEBS open bio · 2016Article
- Novel α-L-Fucosidases from a Soil Metagenome for Production of Fucosylated Human Milk Oligosaccharides.PloS one · 2016Article
- A snapshot of microbial communities from the Kutch: one of the largest salt deserts in the World.Extremophiles : life under extreme conditions · 2015Article
- Metagenome Skimming of Insect Specimen Pools: Potential for Comparative Genomics.Genome biology and evolution · 2015Article
- Improved cultivation and metagenomics as new tools for bioprospecting in cold environments.Extremophiles : life under extreme conditions · 2015Review
- Efficient PCR-based amplification of diverse alcohol dehydrogenase genes from metagenomes for improving biocatalysis: screening of gene-specific amplicons from metagenomes.Applied and environmental microbiology · 2014Article
- Metagenomic small molecule discovery methods.Current opinion in microbiology · 2014Article
- Harnessing microbiome and probiotic research in sub-Saharan Africa: recommendations from an African workshop.Microbiome · 2014Article
Corrections and comments
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Authors and funding
2 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The microbial diversity in soil ecosystems is higher than in any other microbial ecosystem. The majority of soil microorganisms has not been characterized, because the dominant members have not been readily culturable on standard cultivation media; therefore, the soil ecosystem is a great reservoir for the discovery of novel microbial enzymes and bioactivities. The soil metagenome, the collective microbial genome, could be cloned and sequenced directly from soils to search for novel microbial resources. This review summarizes the microbial diversity in soils and the efforts to search for microbial resources from the soil metagenome, with more emphasis on the potential of bioprospecting metagenomics and recent discoveries.
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