Evidence map›Paper›PMID 24123815›Full record

ArticleJournal of bacteriology2013

Identification of a DNA-damage-inducible regulon in Acinetobacter baumannii.

Jesús Aranda, Margarita Poza, Miguel Shingu-Vázquez, Pilar Cortés, John D Boyce, Ben Adler, Jordi Barbé, Germán Bou

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.0field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. The fitness connection of antibiotic resistance.Frontiers in microbiology · 2025
    Article
  5. Article
  6. Article
  7. Repression ofJournal of bacteriology · 2024
    Article
  8. Alterations in gene expression ofJournal of medicine and life · 2023
    Article
  9. DNA damage response coregulatorFrontiers in cellular and infection microbiology · 2023
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Homodimerization and heterodimerization requirements ofCanadian journal of microbiology · 2021
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. iTRAQ-Based Comparative Proteomic Analysis ofFrontiers in microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Jesús ArandaServizo de Microbioloxía-INIBIC, Complexo Hospitalario Universitario A Coruña, A Coruña, Spain.
Margarita Poza
Miguel Shingu-Vázquez
Pilar Cortés
John D Boyce
Ben Adler
Jordi Barbé
Germán Bou
Universitat Autònoma de Barcelona · ESAustralian Research Council · AUComplexo Hospitalario Universitario A Coruña · ESMonash University · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The transcriptional response of Acinetobacter baumannii, a major cause of nosocomial infections, to the DNA-damaging agent mitomycin C (MMC) was studied using DNA microarray technology. Most of the 39 genes induced by MMC were related to either prophages or encoded proteins involved in DNA repair. Electrophoretic mobility shift assays demonstrated that the product of the A. baumannii MMC-inducible umuD gene (umuDAb) specifically binds to the palindromic sequence TTGAAAATGTAACTTTTTCAA present in its promoter region. Mutations in this palindromic region abolished UmuDAb protein binding. A comparison of the promoter regions of all MMC-induced genes identified four additional transcriptional units with similar palindromic sequences recognized and specifically bound by UmuDAb. Therefore, the UmuDAb regulon consists of at least eight genes encoding seven predicted error-prone DNA polymerase V components and DddR, a protein of unknown function. Expression of these genes was not induced in the MMC-treated recA mutant. Furthermore, inactivation of the umuDAb gene resulted in the deregulation of all DNA-damage-induced genes containing the described palindromic DNA motif. Together, these findings suggest that UmuDAb is a direct regulator of the DNA damage response in A. baumannii.

Indexed as

DNA DamageGene Expression Regulation, BacterialRegulonAcinetobacter baumanniiAnti-Bacterial AgentsBinding SitesDNA Mutational AnalysisDNA Repair EnzymesElectrophoretic Mobility Shift AssayGene Expression ProfilingMicroarray AnalysisMitomycinPromoter Regions, GeneticProtein BindingAnti-Bacterial AgentsDNA Repair EnzymesMitomycin

Identifiers

PMID24123815
PMCPMC3889614
OpenAlexW2039744009

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.