Evidence map›Paper›PMID 24123251›Full record

ArticleJournal of experimental botany2013

Proteomic and phosphoproteomic analysis of polyethylene glycol-induced osmotic stress in root tips of common bean (Phaseolus vulgaris L.).

Zhong-Bao Yang, Dejene Eticha, Hendrik Führs, Dimitri Heintz, Daniel Ayoub, Alain Van Dorsselaer, Barbara Schlingmann, Idupulapati Madhusudana Rao, Hans-Peter Braun, Walter Johannes Horst

Open access · greenAbstract read
In one paragraph

Article in Journal of experimental botany, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
8.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. International journal of molecular sciences · 2021
    Review
  3. Review
  4. Article
  5. The Phosphoproteomic Response of Okra (International journal of molecular sciences · 2019
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Role of Proteomics in Crop Stress Tolerance.Frontiers in plant science · 2016
    Review
  14. Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 4 countries.

Zhong-Bao YangThe Key Laboratory of Plant Cell Engineering and Germplasm Innovation, Ministry of Education, College of Life Science, Shandong University, Jinan 250100, PR China.
Dejene Eticha
Hendrik Führs
Dimitri Heintz
Daniel Ayoub
Alain Van Dorsselaer
Barbara Schlingmann
Idupulapati Madhusudana Rao
Hans-Peter Braun
Walter Johannes Horst
Leibniz University Hannover · DEUniversité de Strasbourg · FRCentre National de la Recherche Scientifique · FRInternational Center for Tropical Agriculture · COK+S (Germany) · DEYara (Germany) · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Previous studies have shown that polyethylene glycol (PEG)-induced osmotic stress (OS) reduces cell-wall (CW) porosity and limits aluminium (Al) uptake by root tips of common bean (Phaseolus vulgaris L.). A subsequent transcriptomic study suggested that genes related to CW processes are involved in adjustment to OS. In this study, a proteomic and phosphoproteomic approach was applied to identify OS-induced protein regulation to further improve our understanding of how OS affects Al accumulation. Analysis of total soluble proteins in root tips indicated that, in total, 22 proteins were differentially regulated by OS; these proteins were functionally categorized. Seventy-seven per- cent of the total expressed proteins were involved in metabolic pathways, particularly of carbohydrate and amino acid metabolism. An analysis of the apoplastic proteome revealed that OS reduced the level of five proteins and increased that of seven proteins. Investigation of the total soluble phosphoproteome suggested that dehydrin responded to OS with an enhanced phosphorylation state without a change in abundance. A cellular immunolocalization analysis indicated that dehydrin was localized mainly in the CW. This suggests that dehydrin may play a major protective role in the OS-induced physical breakdown of the CW structure and thus maintenance of the reversibility of CW extensibility during recovery from OS. The proteomic and phosphoproteomic analyses provided novel insights into the complex mechanisms of OS-induced reduction of Al accumulation in the root tips of common bean and highlight a key role for modification of CW structure.

Indexed as

Osmotic PressureAmino AcidsCarbohydrate MetabolismCell WallElectrophoresis, Gel, Two-DimensionalPhaseolusPhosphoproteinsPlant ProteinsPlant RootsPolyethylene GlycolsProteomicsAmino Acidsdehydrin proteins, plantPhosphoproteinsPlant ProteinsPolyethylene GlycolsApoplastcell wallcommon beandehydrinphosphoproteomicsproteomicsroot tips.

Identifiers

PMID24123251
PMCPMC3871817
OpenAlexW2168203962

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.