ArticleArchives of virology2014
Molecular characterization and phylogenetic analysis of the genome of porcine torovirus.
Article in Archives of virology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
15 citing papers in PubMed, 22 citations in OpenAlex.
- Mechanism, structural and functional insights into nidovirus-induced double-membrane vesicles.Frontiers in immunology · 2024Review
- Recent Progress in Torovirus Molecular Biology.Viruses · 2021Review
- Nidoviruses in Reptiles: A Review.Frontiers in veterinary science · 2021Review
- The taxonomy, host range and pathogenicity of coronaviruses and other viruses in theAnimal diseases · 2021Review
- Characterization of Self-Processing Activities and Substrate Specificities of Porcine Torovirus 3C-Like Protease.Journal of virology · 2020Article
- Serpentoviruses: More than Respiratory Pathogens.Journal of virology · 2020Article
- First detection and genomic characteristics of bovine torovirus in dairy calves in China.Archives of virology · 2020Article
- Investigations into the presence of nidoviruses in pythons.Virology journal · 2020Article
- Porcine Torovirus (PToV)-A Brief Review of Etiology, Diagnostic Assays and Current Epidemiology.Frontiers in veterinary science · 2019Review
- Activation of the autophagy pathway by Torovirus infection is irrelevant for virus replication.PloS one · 2019Article
- Transcriptional and Translational Landscape of Equine Torovirus.Journal of virology · 2018Article
- Nidovirus-Associated Proliferative Pneumonia in the Green Tree Python (Morelia viridis).Journal of virology · 2017Article
- Whole genome analysis of Japanese bovine toroviruses reveals natural recombination between porcine and bovine toroviruses.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2016Article
- Discovery of a novel nidovirus in cattle with respiratory disease.The Journal of general virology · 2015Article
- Molecular epidemiology of Porcine torovirus (PToV) in Sichuan Province, China: 2011-2013.Virology journal · 2014Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
6 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
In this study, we amplified and sequenced the first genome of porcine torovirus (PToV SH1 strain). The genome was found to be 28,301 bp in length, sharing 79 % identity with Breda virus. It mainly consists of replicase (20,906 bp) and structural genes: spike (4,722 bp), membrane (702 bp), hemagglutinin-esterase (1,284 bp), and nucleocapsid (492 bp). Sequence alignments and structure prediction suggest genetic differences among toroviruses, mainly in NSP1 (papain-like cysteine proteinase domain). Rooted phylogenetic trees were constructed based on the 3C-like proteinase and RNA-dependent RNA polymerase genes. PToV, Berne virus and Breda virus were clustered together, forming a separate branch from white bream virus that was distant from that of the coronaviruses.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.