Evidence map›Paper›PMID 24122053›Full record

ArticleG3 (Bethesda, Md.)2013

MAPfastR: quantitative trait loci mapping in outbred line crosses.

Ronald M Nelson, Carl Nettelblad, Mats E Pettersson, Xia Shen, Lucy Crooks, Francois Besnier, José M Alvarez-Castro, Lars Rönnegård, Weronica Ek, Zheya Sheng and 3 more

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Ronald M NelsonDepartment of Clinical Sciences, Swedish University of Agricultural Sciences, SE-75007 Uppsala, Sweden.
Carl Nettelblad
Mats E Pettersson
Xia Shen
Lucy Crooks
Francois Besnier
José M Alvarez-Castro
Lars Rönnegård
Weronica Ek
Zheya Sheng
Marcin Kierczak
Sverker Holmgren
Orjan Carlborg

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAPfastR is a software package developed to analyze quantitative trait loci data from inbred and outbred line-crosses. The package includes a number of modules for fast and accurate quantitative trait loci analyses. It has been developed in the R language for fast and comprehensive analyses of large datasets. MAPfastR is freely available at: http://www.computationalgenetics.se/?page_id=7.

Indexed as

Crosses, GeneticQuantitative Trait LociSoftwareChromosome MappingLeast-Squares AnalysisRegression Analysisinbred line crossoutbred line crossQTL mappingquantitative genetics

Identifiers

PMID24122053
PMCPMC3852377

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.