Evidence map›Paper›PMID 24122040›Full record

ArticleNature methods2013

Detergent-free mass spectrometry of membrane protein complexes.

Jonathan T S Hopper, Yvonne Ting-Chun Yu, Dianfan Li, Alison Raymond, Mark Bostock, Idlir Liko, Victor Mikhailov, Arthur Laganowsky, Justin L P Benesch, Martin Caffrey and 2 more

Abstract read
In one paragraph

Article in Nature methods, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 84 papers.

0numbers the graph read from it
0cells of the map it votes in
84citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

84 citing papers in PubMed.

  1. Expanding Native Mass Spectrometry to the Masses.Journal of the American Society for Mass Spectrometry · 2024
    Article
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24 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Jonathan T S HopperDepartment of Chemistry, Physical and Theoretical Chemistry Laboratory, University of Oxford, Oxford, UK.
Yvonne Ting-Chun Yu
Dianfan Li
Alison Raymond
Mark Bostock
Idlir Liko
Victor Mikhailov
Arthur Laganowsky
Justin L P Benesch
Martin Caffrey
Daniel Nietlispach
Carol V Robinson

Funding

Yeast ExpressionP50GM073210 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI STROUD, ROBERT M · 2004 to 2013
$21.5M
Center for the Rational Design of Membrane Protein CrystallographyU54GM094599 · NIGMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI FROMME, PETRA · 2010 to 2014
$6.8M
Membrane Proteins. Crystallogenesis/X-ray Structure(RMI)R01GM075915 · NIGMS · UNIVERSITY OF LIMERICK · PI CAFFREY, MARTIN D. · 2005 to 2009
$984k
Biotechnology and Biological Sciences Research Council BB/E013228/1Biotechnology and Biological Sciences Research Council BB/G011915/1Biotechnology and Biological Sciences Research Council BB/K01983X/1European Research Council 268851Medical Research Council G1000819NIGMS NIH HHS P50 GM073210NIGMS NIH HHS R01 GM075915NIGMS NIH HHS U54 GM094599Wellcome Trust 093305
6 · The paper itself

Abstract

We developed a method that allows release of intact membrane protein complexes from amphipols, bicelles and nanodiscs in the gas phase for observation by mass spectrometry (MS). Current methods involve release of membrane protein complexes from detergent micelles, which reveals subunit composition and lipid binding. We demonstrated that oligomeric complexes or proteins requiring defined lipid environments are stabilized to a greater extent in the absence of detergent.

Indexed as

MicellesDetergentsDiacylglycerol KinaseDiffusionEscherichia coliEscherichia coli ProteinsGreen Fluorescent ProteinsHalobacteriaceaeLipidsMagnetic Resonance SpectroscopyMass SpectrometryMembrane ProteinsMicroscopy, Electron, TransmissionMonosaccharide Transport ProteinsNanoparticlesPlasmidsDetergentsDiacylglycerol KinaseEscherichia coli ProteinsGreen Fluorescent ProteinsLacY protein, E coliLipidsMembrane ProteinsMicellesMonosaccharide Transport ProteinsSensory RhodopsinsSymporters

Identifiers

PMID24122040
PMCPMC3868940

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.