Evidence map›Paper›PMID 24121514›Full record

ArticleThe Journal of biological chemistry2013

Elastin degradation by cathepsin V requires two exosites.

Xin Du, Nelson L H Chen, Andre Wong, Charles S Craik, Dieter Brömme

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Cells · 2020
    Review
  11. Article
  12. Review
  13. Article
  14. Cathepsins: Proteases that are vital for survival but can also be fatal.Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie · 2018
    Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Xin DuFrom the Department of Biochemistry and Molecular Biology, Faculty of Medicine, Center for Blood Research, and.
Nelson L H Chen
Andre Wong
Charles S Craik
Dieter Brömme
University of British Columbia · CAUniversity of California, San Francisco · US

Funding

A Technological Platform for the Identification of Serine Proteases in CancerR01CA128765 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CRAIK, CHARLES SCOTT · 2009 to 2011
$1.1M
CIHR MOP89974NCI NIH HHS R01 CA128765
6 · The paper itself

Abstract

Cathepsin V is a highly effective elastase and has been implicated in physiological and pathological extracellular matrix degradation. However, its mechanism of action remains elusive. Whereas human cathepsin V exhibits a potent elastolytic activity, the structurally homologous cathepsin L, which shares a 78% amino acid sequence, has only a minimal proteolytic activity toward insoluble elastin. This suggests that there are distinct structural domains that play an important role in elastinolysis. In this study, a total of 11 chimeras of cathepsins V and L were generated to identify elastin-binding domains in cathepsin V. Evaluation of these chimeras revealed two exosites contributing to the elastolytic activity of cathepsin V that are distant from the active cleft of the protease and are located in surface loop regions. Replacement of exosite 1 or 2 with analogous residues from cathepsin L led to a 75 and 43% loss in the elastolytic activity, respectively. Replacement of both exosites yielded a non-elastase variant similar to that of cathepsin L. Identification of these exosites may contribute to the design of inhibitors that will only affect the elastolytic activity of cysteine cathepsins without interfering with other physiological protease functions.

Indexed as

Amino Acid SequenceBinding SitesCathepsin LCathepsinsCysteine EndopeptidasesElastinExtracellular MatrixHumansMacrophagesMicroscopy, Electron, ScanningMutagenesis, Site-DirectedPancreatic ElastaseProtein BindingProtein Structure, SecondaryProteolysisStructural Homology, ProteinCathepsin LCathepsinsCTSL protein, humanCTSV protein, humanCysteine EndopeptidasesElastinPancreatic ElastaseCathepsin VCysteine ProteaseElastaseElastinExositeExtracellular Matrix ProteinsProtein DegradationSite-directed MutagenesisSubstrate Specificity

Identifiers

PMID24121514
PMCPMC3843099
OpenAlexW2018614644

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.