ArticleJournal of synchrotron radiation2013
Experiences with archived raw diffraction images data: capturing cisplatin after chemical conversion of carboplatin in high salt conditions for a protein crystal.
Article in Journal of synchrotron radiation, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
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Who cites it
15 citing papers in PubMed, 21 citations in OpenAlex.
- The science is in the data.IUCrJ · 2017Review
- Raw diffraction data preservation and reuse: overview, update on practicalities and metadata requirements.IUCrJ · 2017Review
- Effect of temperature on the interaction of cisplatin with the model protein hen egg white lysozyme.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2016Article
- Data publication with the structural biology data grid supports live analysis.Nature communications · 2016Article
- Assessing and maximizing data quality in macromolecular crystallography.Current opinion in structural biology · 2015Review
- Crystallography and chemistry should always go together: a cautionary tale of protein complexes with cisplatin and carboplatin.Acta crystallographica. Section D, Biological crystallography · 2015Article
- Structural biology. Division of labor in transhydrogenase by alternating proton translocation and hydride transfer.Science (New York, N.Y.) · 2015Article
- Protein Recognition of Gold-Based Drugs: 3D Structure of the Complex Formed When Lysozyme Reacts with Aubipy(c.).ACS medicinal chemistry letters · 2014Article
- Experiences with making diffraction image data available: what metadata do we need to archive?Acta crystallographica. Section D, Biological crystallography · 2014Article
- A crystallographic perspective on sharing data and knowledge.Journal of computer-aided molecular design · 2014Article
- Archiving raw crystallographic data.Acta crystallographica. Section D, Biological crystallography · 2014Article
- Chemical conversion of cisplatin and carboplatin with histidine in a model protein crystallized under sodium iodide conditions.Acta crystallographica. Section F, Structural biology communications · 2014Article
- Carboplatin binding to histidine.Acta crystallographica. Section F, Structural biology communications · 2014Article
- The binding of platinum hexahalides (Cl, Br and I) to hen egg-white lysozyme and the chemical transformation of the PtI6 octahedral complex to a PtI3 moiety bound to His15.Acta crystallographica. Section F, Structural biology communications · 2014Article
- Structural dynamics of cisplatin binding to histidine in a protein.Structural dynamics (Melville, N.Y.) · 2014Article
Corrections and comments
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Authors and funding
5 authors at 3 institutions in 3 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The archiving of raw diffraction images data is the focus of an IUCr Diffraction Data Deposition Working Group (see http://forums.iucr.org/). Experience in archiving and sharing of raw diffraction images data in collaboration between Manchester and Utrecht Universities, studying the binding of the important anti-cancer agents, cisplatin and carboplatin to histidine in a protein, has recently been published. Subsequently, these studies have been expanded due to further analyses of each data set of raw diffraction images using the diffraction data processing program XDS. The raw diffraction images, measured at Manchester University, are available for download at Utrecht University and now also mirrored at the Tardis Raw Diffraction Data Archive in Australia. Thus a direct comparison of processed diffraction and derived protein model data from XDS with the published results has been made. The issue of conversion of carboplatin to cisplatin under a high chloride salt concentration has been taken up and a detailed crystallographic assessment is provided. Overall, these new structural chemistry research results are presented followed by a short summary of developing raw data archiving policy and practicalities as well as documenting the challenge of making appropriate and detailed recording of the metadata for crystallography.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.