Evidence map›Paper›PMID 24121311›Full record

ArticleThe EMBO journal2013

The MADS transcription factor XAL2/AGL14 modulates auxin transport during Arabidopsis root development by regulating PIN expression.

Adriana Garay-Arroyo, Enrique Ortiz-Moreno, María de la Paz Sánchez, Angus S Murphy, Berenice García-Ponce, Nayelli Marsch-Martínez, Stefan de Folter, Adriana Corvera-Poiré, Fabiola Jaimes-Miranda, Mario A Pacheco-Escobedo and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
11.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 99 citations in OpenAlex.

  1. Mechanisms of auxin action in plant growth and development.Nature reviews. Molecular cell biology · 2025
    Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. An Overview on MADS Box Members in Plants: A Meta-Review.International journal of molecular sciences · 2024
    Review
  7. Article
  8. Article
  9. The MADS-box genesFrontiers in plant science · 2024
    Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. COE2 Is Required for the Root Foraging Response to Nitrogen Limitation.International journal of molecular sciences · 2022
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 4 countries.

Adriana Garay-ArroyoDepto. de Ecología Funcional. Laboratorio de Genética Molecular, Desarrollo y Evolución de Plantas, Instituto de Ecología, Universidad Nacional Autónoma de México, 3er Circuito Ext. Junto a J. Botánico, Ciudad Universitaria, UNAM, México DF, México.
Enrique Ortiz-Moreno
María de la Paz Sánchez
Angus S Murphy
Berenice García-Ponce
Nayelli Marsch-Martínez
Stefan de Folter
Adriana Corvera-Poiré
Fabiola Jaimes-Miranda
Mario A Pacheco-Escobedo
Joseph G Dubrovsky
Soraya Pelaz
Elena R Álvarez-Buylla
Instituto de Ecología · MXCarnegie Department of Plant Biology · USCentro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional · MXFundación Biodiversidad · ESInstitució Catalana de Recerca i Estudis Avançats · ESUniversidad Americana de Morelos · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Elucidating molecular links between cell-fate regulatory networks and dynamic patterning modules is a key for understanding development. Auxin is important for plant patterning, particularly in roots, where it establishes positional information for cell-fate decisions. PIN genes encode plasma membrane proteins that serve as auxin efflux transporters; mutations in members of this gene family exhibit smaller roots with altered root meristems and stem-cell patterning. Direct regulators of PIN transcription have remained elusive. Here, we establish that a MADS-box gene (XAANTAL2, XAL2/AGL14) controls auxin transport via PIN transcriptional regulation during Arabidopsis root development; mutations in this gene exhibit altered stem-cell patterning, root meristem size, and root growth. XAL2 is necessary for normal shootward and rootward auxin transport, as well as for maintaining normal auxin distribution within the root. Furthermore, this MADS-domain transcription factor upregulates PIN1 and PIN4 by direct binding to regulatory regions and it is required for PIN4-dependent auxin response. In turn, XAL2 expression is regulated by auxin levels thus establishing a positive feedback loop between auxin levels and PIN regulation that is likely to be important for robust root patterning.

Indexed as

ArabidopsisArabidopsis ProteinsIndoleacetic AcidsMADS Domain ProteinsMembrane Transport ProteinsPlant RootsArabidopsis ProteinsIndoleacetic AcidsMADS Domain ProteinsMembrane Transport ProteinsPIN1 protein, ArabidopsisPIN4 protein, Arabidopsis

Identifiers

PMID24121311
PMCPMC3817466
OpenAlexW2014744809

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.