Evidence map›Paper›PMID 24120751›Full record

ArticleFree radical biology & medicine2013

A biophysically based mathematical model for the catalytic mechanism of glutathione reductase.

Venkat R Pannala, Jason N Bazil, Amadou K S Camara, Ranjan K Dash

Open access · greenAbstract read
In one paragraph

Article in Free radical biology & medicine, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 48 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Venkat R PannalaBiotechnology and Bioengineering Center and Department of Physiology and.
Jason N BazilBiotechnology and Bioengineering Center and Department of Physiology and.
Amadou K S CamaraDepartment of Anesthesiology, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
Ranjan K DashBiotechnology and Bioengineering Center and Department of Physiology and. Electronic address: rdash@mcw.edu.
Bioengineering Center · RUMedical College of Wisconsin · US

Funding

The Virtual Physiological Rat ProjectP50GM094503 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BEARD, DANIEL A · 2011 to 2015
$11.6M
Cations and ROS in Modulating Mitochondrial Function in Normal and Ischemic HeartR01HL095122 · NHLBI · MEDICAL COLLEGE OF WISCONSIN · PI CAMARA, AMADOU K., DASH, RANJAN K · 2010 to 2013
$2.1M
NHLBI NIH HHS R01 HL095122NHLBI NIH HHS R01-HL095122NIGMS NIH HHS P50 GM094503NIGMS NIH HHS P50-GM094503
6 · The paper itself

Abstract

Glutathione reductase (GR) catalyzes the reduction of oxidized glutathione (GSSG) to reduced glutathione (GSH) using NADPH as the reducing cofactor, and thereby maintains a constant GSH level in the system. GSH scavenges superoxide (O2(*-)) and hydroxyl radicals (OH) nonenzymatically or by serving as an electron donor to several enzymes involved in reactive oxygen species (ROS) detoxification. In either case, GSH oxidizes to GSSG and is subsequently regenerated by the catalytic action of GR. Although the GR kinetic mechanism has been extensively studied under various experimental conditions with variable substrates and products, the catalytic mechanism has not been studied in terms of a mechanistic model that accounts for the effects of the substrates and products on the reaction kinetics. The aim of this study is therefore to develop a comprehensive mathematical model for the catalytic mechanism of GR. We use available experimental data on GR kinetics from various species/sources to develop the mathematical model and estimate the associated model parameters. The model simulations are consistent with the experimental observation that GR operates via both ping-pong and sequential branching mechanisms based on relevant concentrations of its reaction substrate GSSG. Furthermore, we show the observed pH-dependent substrate inhibition of GR activity by GSSG and bimodal behavior of GR activity with pH. The model presents a unique opportunity to understand the effects of products on the kinetics of GR. The model simulations show that under physiological conditions, where both substrates and products are present, the flux distribution depends on the concentrations of both GSSG and NADP(+), with ping-pong flux operating at low levels and sequential flux dominating at higher levels. The kinetic model of GR may serve as a key module for the development of integrated models for ROS-scavenging systems to understand protection of cells under normal and oxidative stress conditions.

Indexed as

AnimalsCatalysisCattleGlutathione DisulfideGlutathione ReductaseHumansHydroxyl RadicalModels, TheoreticalNADPOxidation-ReductionOxidative StressSuperoxidesGlutathione DisulfideGlutathione ReductaseHydroxyl RadicalNADPSuperoxidesEnzyme kineticsFree radicalsGlutathioneGlutathione reductaseMathematical modelingRedox biologyROS scavenging

Identifiers

PMID24120751
PMCPMC3870161
OpenAlexW2013159801

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.