SynthesisAging cell2014
Meta-analysis on blood transcriptomic studies identifies consistently coexpressed protein-protein interaction modules as robust markers of human aging.
Synthesis in Aging cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 2 of them syntheses that pooled it.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
31 citing papers in PubMed, 2 syntheses or guidelines pooled it.
- Pooled it
- The transcriptional landscape of age in human peripheral blood.Nature communications · 2015Pooled it
- Article
- Review
- Characterization of the T-cell receptor repertoire associated with lymph node metastasis in colorectal cancer.Frontiers in oncology · 2024Article
- Improving the Prognosis of Colon Cancer through Knowledge-Based Clinical-Molecular Integrated Analysis.BioMed research international · 2021Article
- Effects of aging on gene expression in blood of captive Tibetan macaques (Zoological research · 2020Article
- DNA methylation QTL analysis identifies new regulators of human longevity.Human molecular genetics · 2020Article
- Monocytes present age-related changes in phospholipid concentration and decreased energy metabolism.Aging cell · 2020Article
- Cross-species functional modules link proteostasis to human normal aging.PLoS computational biology · 2019Article
- Gene expression hallmarks of cellular ageing.Biogerontology · 2018Review
- The RNA world of human ageing.Human genetics · 2018Review
- A comprehensive analysis of prognosis prediction models based on pathway‑level, gene‑level and clinical information for glioblastoma.International journal of molecular medicine · 2018Article
- Transcriptomic alterations during ageing reflect the shift from cancer to degenerative diseases in the elderly.Nature communications · 2018Article
- Whole-exome sequencing identifies common and rare variant metabolic QTLs in a Middle Eastern population.Nature communications · 2018Article
- sPAGM: inferring subpathway activity by integrating gene and miRNA expression-robust functional signature identification for melanoma prognoses.Scientific reports · 2017Article
- Genetic interplay between human longevity and metabolic pathways - a large-scale eQTL study.Aging cell · 2017Article
- Identification of a T cell gene expression clock obtained by exploiting a MZ twin design.Scientific reports · 2017Article
- Brain transcriptome atlases: a computational perspective.Brain structure & function · 2017Review
- A reverse genetics cell-based evaluation of genes linked to healthy human tissue age.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2017Article
Corrections and comments
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Authors and funding
17 authors.
Funding
Abstract
The bodily decline that occurs with advancing age strongly impacts on the prospects for future health and life expectancy. Despite the profound role of age in disease etiology, knowledge about the molecular mechanisms driving the process of aging in humans is limited. Here, we used an integrative network-based approach for combining multiple large-scale expression studies in blood (2539 individuals) with protein-protein Interaction (PPI) data for the detection of consistently coexpressed PPI modules that may reflect key processes that change throughout the course of normative aging. Module detection followed by a meta-analysis on chronological age identified fifteen consistently coexpressed PPI modules associated with chronological age, including a highly significant module (P = 3.5 × 10(-38)) enriched for 'T-cell activation' marking age-associated shifts in lymphocyte blood cell counts (R(2) = 0.603; P = 1.9 × 10(-10)). Adjusting the analysis in the compendium for the 'T-cell activation' module showed five consistently coexpressed PPI modules that robustly associated with chronological age and included modules enriched for 'Translational elongation', 'Cytolysis' and 'DNA metabolic process'. In an independent study of 3535 individuals, four of five modules consistently associated with chronological age, underpinning the robustness of the approach. We found three of five modules to be significantly enriched with aging-related genes, as defined by the GenAge database, and association with prospective survival at high ages for one of the modules including ASF1A. The hereby-detected age-associated and consistently coexpressed PPI modules therefore may provide a molecular basis for future research into mechanisms underlying human aging.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.