Evidence map›Paper›PMID 24117378›Full record

ArticleACS chemical biology2014

Unbiased screening of marine sponge extracts for anti-inflammatory agents combined with chemical genomics identifies girolline as an inhibitor of protein synthesis.

Shan-Yu Fung, Vladimir Sofiyev, Julia Schneiderman, Aaron F Hirschfeld, Rachel E Victor, Kate Woods, Jeff S Piotrowski, Raamesh Deshpande, Sheena C Li, Nicole J de Voogd and 4 more

Abstract read
In one paragraph

Article in ACS chemical biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 27 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Decyl Gallate as a Possible Inhibitor of N-Glycosylation Process inAntimicrobial agents and chemotherapy · 2019
    Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Plant-derived antifungal agent poacic acid targets β-1,3-glucan.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  16. Article
  17. Forazoline A: marine-derived polyketide with antifungal in vivo efficacy.Angewandte Chemie (International ed. in English) · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 3 countries.

Shan-Yu FungDepartment of Pediatrics, British Columbia Children's Hospital and Child & Family Research Institute, University of British Columbia , Vancouver, British Columbia V5Z 4H4, Canada.
Vladimir Sofiyev
Julia Schneiderman
Aaron F Hirschfeld
Rachel E Victor
Kate Woods
Jeff S Piotrowski
Raamesh Deshpande
Sheena C Li
Nicole J de Voogd
Chad L Myers
Charlie Boone
Raymond J Andersen
Stuart E Turvey
University of British Columbia · CABC Children's Hospital · CATwin Cities Orthopedics · USUniversity of Toronto · CAChild and Family Research Institute · CANaturalis Biodiversity Center · NLUniversity of Wisconsin–Madison · US

Funding

Methods for large-scale analysis of chemical-genetic interactionsR01HG005084 · NHGRI · UNIVERSITY OF MINNESOTA · PI MYERS, CHAD L · 2010 to 2022
$2.9M
Sparse Structural Equation Models for Gene Networks and Chemical GenomicsR01GM104975 · NIGMS · UNIVERSITY OF MIAMI CORAL GABLES · PI CAI, XIAODONG · 2012 to 2016
$1.8M
CIHR MOP-57830NHGRI NIH HHS 1R01HG005084-01A1NHGRI NIH HHS R01 HG005084NIGMS NIH HHS 1R01GM104975-01NIGMS NIH HHS R01 GM104975
6 · The paper itself

Abstract

Toll-like receptors (TLRs) play a critical role in innate immunity, but activation of TLR signaling pathways is also associated with many harmful inflammatory diseases. Identification of novel anti-inflammatory molecules targeting TLR signaling pathways is central to the development of new treatment approaches for acute and chronic inflammation. We performed high-throughput screening from crude marine sponge extracts on TLR5 signaling and identified girolline. We demonstrated that girolline inhibits signaling through both MyD88-dependent and -independent TLRs (i.e., TLR2, 3, 4, 5, and 7) and reduces cytokine (IL-6 and IL-8) production in human peripheral blood mononuclear cells and macrophages. Using a chemical genomics approach, we identified Elongation Factor 2 as the molecular target of girolline, which inhibits protein synthesis at the elongation step. Together these data identify the sponge natural product girolline as a potential anti-inflammatory agent acting through inhibition of protein synthesis.

Indexed as

AnimalsAnti-Inflammatory AgentsCells, CulturedCHO CellsCricetulusDrug Evaluation, PreclinicalHumansImidazolesInterleukin-6Interleukin-8Leukocytes, MononuclearMacrophagesMyeloid Differentiation Factor 88PoriferaProtein BiosynthesisToll-Like ReceptorsAnti-Inflammatory AgentsgirollineImidazolesInterleukin-6Interleukin-8Myeloid Differentiation Factor 88Toll-Like Receptors

Identifiers

PMID24117378
PMCPMC4371607
OpenAlexW2327598430

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.