Evidence map›Paper›PMID 24116184›Full record

ArticlePloS one2013

Epistatic Interactions between apolipoprotein E and hemoglobin S Genes in regulation of malaria parasitemia.

Virginie Rougeron, Caira M Woods, Kathryn E Tiedje, Florence Bodeau-Livinec, Florence Migot-Nabias, Philippe Deloron, Adrian J F Luty, Freya J I Fowkes, Karen P Day

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Evidence of strain structure inProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  5. Article
  6. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 3 countries.

Virginie RougeronDepartment of Microbiology, Division of Medical Parasitology, New York University School of Medicine, New York, New York, United States of America.
Caira M Woods
Kathryn E Tiedje
Florence Bodeau-Livinec
Florence Migot-Nabias
Philippe Deloron
Adrian J F Luty
Freya J I Fowkes
Karen P Day
New York University · USInstitut de Recherche pour le Développement · FR

Funding

P.falciparum var gene diversity and malaria controlR01AI084156 · NIAID · UNIVERSITY OF MELBOURNE · PI DAY, KAREN PATRICIA · 2010 to 2014
$1.9M
Human Genetic Polymorphisms in Malaria-endemic AreasF31GM086134 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI WOODS, CAIRA M · 2008 to 2009
$44k
NIAID NIH HHS R01 AI084156NIAID NIH HHS R01-AI-084156NIGMS NIH HHS F31 GM086134NIGMS NIH HHS F31-GM-86134Wellcome TrustWellcome Trust 041354
6 · The paper itself

Abstract

Apolipoprotein E is a monomeric protein secreted by the liver and responsible for the transport of plasma cholesterol and triglycerides. The APOE gene encodes 3 isoforms Ɛ4, Ɛ3 and Ɛ2 with APOE Ɛ4 associated with higher plasma cholesterol levels and increased pathogenesis in several infectious diseases (HIV, HSV). Given that cholesterol is an important nutrient for malaria parasites, we examined whether APOE Ɛ4 was a risk factor for Plasmodium infection, in terms of prevalence or parasite density. A cross sectional survey was performed in 508 children aged 1 to 12 years in Gabon during the wet season. Children were screened for Plasmodium spp. infection, APOE and hemoglobin S (HbS) polymorphisms. Median parasite densities were significantly higher in APOE Ɛ4 children for Plasmodium spp. densities compared to non-APOE Ɛ4 children. When stratified for HbS polymorphisms, median Plasmodium spp. densities were significantly higher in HbAA children if they had an APOE Ɛ4 allele compared to those without an APOE Ɛ4 allele. When considering non-APOE Ɛ4 children, there was no quantitative reduction of Plasmodium spp. parasite densities for HbAS compared to HbAA phenotypes. No influence of APOE Ɛ4 on successful Plasmodium liver cell invasion was detected by multiplicity of infection. These results show that the APOE Ɛ4 allele is associated with higher median malaria parasite densities in children likely due to the importance of cholesterol availability to parasite growth and replication. Results suggest an epistatic interaction between APOE and HbS genes such that sickle cell trait only had an effect on parasite density in APOE Ɛ4 children. This suggests a linked pathway of regulation of parasite density involving expression of these genes. These findings have significance for understanding host determinants of regulation of malaria parasite density, the design of clinical trials as well as studies of co-infection with Plasmodium and other pathogens.

Indexed as

Epistasis, GeneticPolymorphism, GeneticAllelesApolipoproteins EChildChild, PreschoolFemaleGabonGenotypeHemoglobin AHemoglobin, SickleHost-Parasite InteractionsHumansInfantMalariaMaleApolipoproteins EHemoglobin Ahemoglobin AAHemoglobin, SickleProtein Isoforms

Identifiers

PMID24116184
PMCPMC3792892
OpenAlexW1970481436

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.