Evidence map›Paper›PMID 24116104›Full record

ArticlePloS one2013

The impact of Helicobacter pylori infection on the gastric microbiota of the rhesus macaque.

Miriam E Martin, Srijak Bhatnagar, Michael D George, Bruce J Paster, Don R Canfield, Jonathan A Eisen, Jay V Solnick

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. The Japanese Society of Hypertension Guidelines for the Management of Hypertension (JSH 2019).Hypertension research : official journal of the Japanese Society of Hypertension · 2019
    Guideline
  2. Article
  3. Review
  4. Occurrence of Free-Living Amoebae in Non-Human Primate Gut.Tropical medicine and infectious disease · 2024
    Article
  5. Article
  6. The Influence ofAntibiotics (Basel, Switzerland) · 2023
    Review
  7. Article
  8. The Exopolysaccharide ofMicroorganisms · 2020
    Article
  9. Article
  10. Article
  11. A Novel View of HumanBiomolecules · 2019
    Review
  12. Article
  13. Article
  14. World journal of gastroenterology · 2018
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Miriam E MartinDepartment of Medicine, University of California Davis, Davis, California, United States of America ; Department of Microbiology and Immunology, University of California Davis, Davis, California, United States of America.
Srijak Bhatnagar
Michael D George
Bruce J Paster
Don R Canfield
Jonathan A Eisen
Jay V Solnick

Funding

National Institute on Aging (NIA) ColonyP51OD011107 · OD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Simon J. Atkinson · 2012 to 2026
$191.5M
Innate immunity and alteration of the oral microbiome in SIV infected rhesus macaR21DE020025 · NIDCR · UNIVERSITY OF CALIFORNIA AT DAVIS · PI GEORGE, MICHAEL D. · 2010 to 2011
$484k
Helicobacter pylori and the gastric microbial community in rhesus macaquesR21AI080788 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI SOLNICK, JAY V. · 2009 to 2010
$421k
NIAID NIH HHS R21 AI080788NIDCR NIH HHS R21 DE020025NIH HHS P51 OD011107
6 · The paper itself

Abstract

Helicobacter pylori colonization is highly prevalent among humans and causes significant gastric disease in a subset of those infected. When present, this bacterium dominates the gastric microbiota of humans and induces antimicrobial responses in the host. Since the microbial context of H. pylori colonization influences the disease outcome in a mouse model, we sought to assess the impact of H. pylori challenge upon the pre-existing gastric microbial community members in the rhesus macaque model. Deep sequencing of the bacterial 16S rRNA gene identified a community profile of 221 phylotypes that was distinct from that of the rhesus macaque distal gut and mouth, although there were taxa in common. High proportions of both H. pylori and H. suis were observed in the post-challenge libraries, but at a given time, only one Helicobacter species was dominant. However, the relative abundance of non-Helicobacter taxa was not significantly different before and after challenge with H. pylori. These results suggest that while different gastric species may show competitive exclusion in the gastric niche, the rhesus gastric microbial community is largely stable despite immune and physiological changes due to H. pylori infection.

Indexed as

AnimalsBacteriaCluster AnalysisDNA, BacterialDNA, RibosomalFemaleGenetic VariationHelicobacter heilmanniiHelicobacter InfectionsHelicobacter pyloriHost-Pathogen InteractionsHumansMacaca mulattaMaleMicrobiotaMouthDNA, BacterialDNA, RibosomalRNA, Ribosomal, 16S

Identifiers

PMID24116104
PMCPMC3792980

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.