Evidence map›Paper›PMID 24115221›Full record

ArticleThe Prostate2014

Evaluation of ERG responsive proteome in prostate cancer.

Shyh-Han Tan, Bungo Furusato, Xueping Fang, Fang He, Ahmed A Mohamed, Nicholas B Griner, Kaneeka Sood, Sadhvi Saxena, Shilpa Katta, Denise Young and 8 more

Open access · greenAbstract readEvaluation Study
In one paragraph

Article in The Prostate, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 4 institutions in 2 countries.

Shyh-Han TanCenter for Prostate Disease Research, Department of Surgery, Uniformed Services University of the Health Sciences, Rockville, Maryland.
Bungo Furusato
Xueping Fang
Fang He
Ahmed A Mohamed
Nicholas B Griner
Kaneeka Sood
Sadhvi Saxena
Shilpa Katta
Denise Young
Yongmei Chen
Taduru Sreenath
Gyorgy Petrovics
Albert Dobi
David G McLeod
Isabell A Sesterhenn
Satya Saxena
Shiv Srivastava
Uniformed Services University of the Health Sciences · USCalifornia Institute for Biomedical Research · USJoint Research Center · BESPEED BioSystems (United States) · US

Funding

Cell Specific Expression Signatures in Prostate Cancer (RO1 DK065977)R01CA162383 · NCI · HENRY M. JACKSON FDN FOR THE ADV MIL/MED · PI SRIVASTAVA, SHIV · 2011 to 2015
$1.1M
NCI NIH HHS R01 CA162383NCI NIH HHS R01CA162383
6 · The paper itself

Abstract

backgroundGene fusion between TMPRSS2 promoter and the ERG proto-oncogene is a major genomic alteration found in over half of prostate cancers (CaP), which leads to aberrant androgen dependent ERG expression. Despite extensive analysis for the biological functions of ERG in CaP, there is no systematic evaluation of the ERG responsive proteome (ERP). ERP has the potential to define new biomarkers and therapeutic targets for prostate tumors stratified by ERG expression.

methodsGlobal proteome analysis was performed by using ERG (+) and ERG (-) CaP cells isolated by ERG immunohistochemistry defined laser capture microdissection and by using TMPRSS2-ERG positive VCaP cells treated with ERG and control siRNA.

resultsWe identified 1,196 and 2,190 unique proteins stratified by ERG status from prostate tumors and VCaP cells, respectively. Comparative analysis of these two proteomes identified 330 concordantly regulated proteins characterizing enrichment of pathways modulating cytoskeletal and actin reorganization, cell migration, protein biosynthesis, and proteasome and ER-associated protein degradation. ERPs unique for ERG (+) tumors reveal enrichment for cell growth and survival pathways while proteasome and redox function pathways were enriched in ERPs unique for ERG (-) tumors. Meta-analysis of ERPs against CaP gene expression data revealed that Myosin VI and Monoamine oxidase A were positively and negatively correlated to ERG expression, respectively.

conclusionsThis study delineates the global proteome for prostate tumors stratified by ERG expression status. The ERP data confirm the functions of ERG in inhibiting cell differentiation and activating cell growth, and identify potentially novel biomarkers and therapeutic targets.

Indexed as

AgedBiomarkers, TumorCell Line, TumorGene Regulatory NetworksHumansMaleMiddle AgedOncogene ProteinsProstatic NeoplasmsProteomeProto-Oncogene MasTrans-ActivatorsTranscriptional Regulator ERGBiomarkers, TumorERG protein, humanMAS1 protein, humanOncogene ProteinsProteomeProto-Oncogene MasTrans-ActivatorsTranscriptional Regulator ERGactin and cytoskeletal reorganizationERGMAOAmyosin VIproteomics

Identifiers

PMID24115221
PMCPMC4075339
OpenAlexW2157489401

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.