Evidence map›Paper›PMID 24115157›Full record

ArticleJournal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research2014

Osterix and NO66 histone demethylase control the chromatin of Osterix target genes during osteoblast differentiation.

Krishna M Sinha, Hideyo Yasuda, Xin Zhou, Benoit deCrombrugghe

Abstract read
In one paragraph

Article in Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 43 citations in OpenAlex.

  1. [Research Advances on Mechanisms and Interventions of DNA Methylation-Regulated Aging-Related Imbalance in Bone Metabolism].Sichuan da xue xue bao. Yi xue ban = Journal of Sichuan University. Medical science edition · 2026
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  8. Mechanisms Regulating Muscle Protein Synthesis in CKD.Journal of the American Society of Nephrology : JASN · 2020
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  13. The Spectrum of Fundamental Basic Science Discoveries Contributing to Organismal Aging.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2018
    Review
  14. Article
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  17. Role of Osterix and MicroRNAs in Bone Formation and Tooth Development.Medical science monitor : international medical journal of experimental and clinical research · 2016
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  18. Review
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  20. Structure of the JmjC domain-containing protein NO66 complexed with ribosomal protein Rpl8.Acta crystallographica. Section D, Biological crystallography · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Krishna M SinhaDepartment of Endocrine Neoplasia and Hormonal Disorders, The University of Texas M.D. Anderson Cancer Center, Houston, TX, USA.
Hideyo Yasuda
Xin Zhou
Benoit deCrombrugghe
The University of Texas MD Anderson Cancer Center · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Fabien Delerue · 1985 to 2026
$290.8M
Genetic Control of Osteoblast DifferentiationR01AR049072 · NIAMS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI DE CROMBRUGGHE, BENOIT · 2002 to 2018
$5.9M
Epigenetic Control of Osteoblast Differentiation and Bone FormationR03AR061590 · NIAMS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI SINHA, KRISHNA M · 2011 to 2013
$233k
NCI NIH HHS CA16672NCI NIH HHS P30 CA016672NIAMS NIH HHS AR061590NIAMS NIH HHS AR49072NIAMS NIH HHS R01 AR049072NIAMS NIH HHS R03 AR061590
6 · The paper itself

Abstract

Commitment of Runx2-expressing precursor osteoblasts to functional osteoblasts and then to osteocytes is triggered by Osterix (Osx), which activates its target genes in those cells during bone formation. It is not yet known whether Osx has a role in remodeling the chromatin architecture of its target genes during the transition from preosteoblast to osteoblast. In testing the hypothesis that Osx is indispensable for active chromatin architecture, we first showed that in Osx-null calvarial cells occupancy of the transcriptional activators, including lysine 4 methyl transferase (Wdr5), c-Myc, and H2A.Z, at the Osx target gene Bsp was very markedly decreased. The levels of methylation of lysines 4 and 36 and acetylation of histone H3, markers for active chromatin, were also reduced at the Bsp gene in these cells. In contrast, occupancy of the transcriptional repressors HP1 and the nucleolar protein 66 (NO66), a histone demethylase previously identified as an Osx-interacting protein, was increased at the Bsp gene in Osx-null calvarial cells. Furthermore, the Bsp promoter was hypermethylated in embryonic stem (ES) cells and in embryonic day 9.5 (E9.5) embryos but was markedly hypomethylated in the calvaria of E18.5 embryos, coinciding with robust Bsp expression. In contrast, CpG methylation in the Bsp promoter remained high in Osx-null calvaria compared to Osx-wild-type calvaria. Our data also revealed that NO66 interacted with DNA Methyltransferase 1A (DNMT1A), histone deacetylase 1A (HDAC1A), and HP1, which are known to control histone and DNA methylation. In addition, HP1 stimulated the demethylase activity of NO66 for its substrates "trimethylation of histone H3 at lysine 4" (H3K4me3) and "trimethylation of histone H3 at lysine 36" (H3K36me3). Our findings strongly suggest that in the absence of Osx, the chromatin of Osx target genes is transcriptionally inactive. We propose that Osx is a molecular switch for the formation of an active chromatin state during osteoblast differentiation, whereas NO66 helps gene repression through histone demethylation and/or formation of a repressor complex, resulting in multilayered control of the chromatin architecture of specific osteoblast genes.

Indexed as

Cell DifferentiationAnimalsBone DevelopmentChromatinChromosomal Proteins, Non-HistoneDioxygenasesDNA MethylationEpigenesis, GeneticHistone DemethylasesIntegrin-Binding SialoproteinMiceOsteoblastsPromoter Regions, GeneticReal-Time Polymerase Chain ReactionSp7 Transcription FactorTranscription FactorsChromatinChromosomal Proteins, Non-HistoneDioxygenasesHistone DemethylasesIbsp protein, mouseIntegrin-Binding SialoproteinRIOX1 protein, humanSp7 protein, mouseSp7 Transcription FactorTranscription FactorsCHROMATINDNA METHYLATIONHISTONE DEMETHYLASENO66OSTEOBLASTSOSTERIX

Identifiers

PMID24115157
PMCPMC3961497
OpenAlexW1911371428

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.