Evidence map›Paper›PMID 24114543›Full record

ArticleInvestigative ophthalmology & visual science2013

Functional principal component analysis reveals discriminating categories of retinal pigment epithelial morphology in mice.

Yi Jiang, Xin Qi, Micah A Chrenek, Christopher Gardner, Jeffrey H Boatright, Hans E Grossniklaus, John M Nickerson

Abstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Stress Inference in Retinal Pigment Epithelium in C57BL/6J Mouse.Investigative ophthalmology & visual science · 2026
    Article
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  8. Molecular therapy. Nucleic acids · 2023
    Article
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  14. Article
  15. Analysis of Damage and Wound Healing in the Retinal Pigmented Epithelium.Advances in experimental medicine and biology · 2019
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. RPE Cell and Sheet Properties in Normal and Diseased Eyes.Advances in experimental medicine and biology · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Yi JiangDepartment of Mathematics and Statistics, Georgia State University, Atlanta, Georgia.
Xin Qi
Micah A Chrenek
Christopher Gardner
Jeffrey H Boatright
Hans E Grossniklaus
John M Nickerson
Emory University · USGeorgia State University · US

Funding

P30-Core Grant for Vision Research Core CP30EY006360 · NEI · EMORY UNIVERSITY · PI BOATRIGHT, JEFFREY H · 1986 to 2025
$15.3M
VIsion Science Training in AtlantaT32EY007092 · NEI · EMORY UNIVERSITY · PI Machelle T. Pardue · 1985 to 2026
$4.6M
Oligonucleotide Repair of a Retinal Degeneration ModelR01EY014026 · NEI · EMORY UNIVERSITY · PI BOATRIGHT, JEFFREY H · 2004 to 2015
$4.1M
Ocular Growth, Emmetropia, and Interphotoreceptor Retinoid-Binding Protein (IRBP)R01EY021592 · NEI · EMORY UNIVERSITY · PI BOATRIGHT, JEFFREY H, IUVONE, P MICHAEL · 2013 to 2021
$3.3M
Gene Delivery in Retinal DiseasesR01EY016470 · NEI · EMORY UNIVERSITY · PI NICKERSON, JOHN M · 2006 to 2015
$3.2M
NEI NIH HHS P30 EY006360NEI NIH HHS P30EY006360NEI NIH HHS R01 EY014026NEI NIH HHS R01EY014026NEI NIH HHS R01 EY016470NEI NIH HHS R01EY016470NEI NIH HHS R01 EY021592NEI NIH HHS R01EY021592NEI NIH HHS T32 EY007092
6 · The paper itself

Abstract

purposeTo determine whether multivariate, functional principal component analysis of the size and shape of retinal pigment epithelial (RPE) cell morphology allows discrimination of mouse RPE genotypes and age.

methodsFlatmounts of RPE sheets obtained from C57BL/6J (n = 50) and rd10 (n = 61) mice at postnatal days 30 to 720 were stained for zonula occludens-1 (ZO-1) and imaged with confocal microscopy. A total of 111 flatmounts were prepared. Twenty-one morphometric measurements were made on tiled, composite images of complete flatmounts, including cell location, area, and eccentricity, using automated image analysis software for quantitatively measuring cell phenotypes.

resultsIn young (≤61-day-old) C57BL/6J mice, the RPE morphology resembled a regular hexagonal array of cells of uniform size throughout the retina, except near the ciliary body, where the shapes of RPE resembled a soft network. Old (≥180-day-old) C57BL/6J eyes had a subpopulation of large cells. A clear disruption of the regular cell size and shape appeared in rd10 mutants. Aspect ratio and cell area gave rise to principal components that predictively classified mouse age and genotype.

conclusionsQuantitative differences in the RPE sheet morphology allowed discrimination of rd10 from C57BL/6J strains despite the confounding effect of aging. This has implications for RPE sheet morphology as a potential early biomarker for diagnosis of eye disease and prognosis of the eye at early stages when disease is subtle. We conclude that an RPE cell's area and aspect ratio are very early quantitative indicators that predict progression to advanced RPE disease as manifested in rd10.

Indexed as

AgingAnimalsGenotypeMiceMice, Inbred C57BLMicroscopy, ConfocalMultivariate AnalysisPrincipal Component AnalysisRetinal Pigment Epitheliumimage analysisretinal degenerationRPE

Identifiers

PMID24114543
PMCPMC4086880
OpenAlexW1986554915

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.