Evidence map›Paper›PMID 24113165›Full record

ArticleAquatic toxicology (Amsterdam, Netherlands)2013

Transcription patterns of genes encoding four metallothionein homologs in Daphnia pulex exposed to copper and cadmium are time- and homolog-dependent.

Jana Asselman, Joseph R Shaw, Stephen P Glaholt, John K Colbourne, Karel A C De Schamphelaere

Open access · bronzeAbstract read
In one paragraph

Article in Aquatic toxicology (Amsterdam, Netherlands), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 36 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Influence of water hardness on zinc toxicity in Daphnia magna.Journal of applied toxicology : JAT · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. The effect of a low iron diet and early life methylmercury exposure in Daphnia pulex.Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association · 2016
    Article
  13. Article
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Jana AsselmanLaboratory of Environmental Toxicology and Aquatic Ecology, Ghent University, Ghent, Belgium. Electronic address: jana.asselman@ugent.be.
Joseph R Shaw
Stephen P Glaholt
John K Colbourne
Karel A C De Schamphelaere
Ghent University · BEIndiana University Bloomington · USUniversity of Birmingham · GB

Funding

Effects of environmental contamination on gene copy number variation: Molecular bR01ES019324 · NIEHS · TRUSTEES OF INDIANA UNIVERSITY · PI SHAW, JOSEPH R. · 2010 to 2014
$2.2M
Daphnia Functional Genomics ResourceR24GM078274 · NIGMS · UTAH STATE UNIVERSITY · PI PFRENDER, MICHAEL EUGENE · 2007 to 2010
$1.4M
NIEHS NIH HHS R01 ES019324NIEHS NIH HHS R01ES019324NIGMS NIH HHS 5R24GM078274NIGMS NIH HHS R24 GM078274
6 · The paper itself

Abstract

Metallothioneins are proteins that play an essential role in metal homeostasis and detoxification in nearly all organisms studied to date. Yet discrepancies between outcomes of chronic and acute exposure experiments hamper the understanding of the regulatory mechanisms of their isoforms following metal exposure. Here, we investigated transcriptional differences among four identified homologs (mt1-mt4) in Daphnia pulex exposed across time to copper and cadmium relative to a control. Transcriptional upregulation of mt1 and mt3 was detected on day four following exposure to cadmium, whereas that of mt2 and mt4 was detected on day two and day eight following exposure to copper. These results confirm temporal and metal-specific differences in the transcriptional induction of genes encoding metallothionein homologs upon metal exposure which should be considered in ecotoxicological monitoring programs of metal-contaminated water bodies. Indeed, the mRNA expression patterns observed here illustrate the complex regulatory system associated with metallothioneins, as these patterns are not only dependent on the metal, but also on exposure time and the homolog studied. Further phylogenetic analysis and analysis of regulatory elements in upstream promoter regions revealed a high degree of similarity between metallothionein genes of Daphnia pulex and Daphnia magna, a species belonging to the same genus. These findings, combined with a limited amount of available expression data for D. magna metallothionein genes, tentatively suggest a potential generalization of the metallothionein response system between these Daphnia species.

Indexed as

AnimalsCadmiumCopperDaphniaGene Expression ProfilingGene Expression RegulationMetallothioneinMolecular Sequence DataPhylogenyWater Pollutants, ChemicalCadmiumCopperMetallothioneinWater Pollutants, ChemicalDaphniaExpressionMetallothioneinsMetals

Identifiers

PMID24113165
PMCPMC3891374
OpenAlexW2064458847

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.