Evidence map›Paper›PMID 24111876›Full record

ArticleBiochemistry2013

Potent inhibition of the C-P lyase nucleosidase PhnI by Immucillin-A triphosphate.

Siddhesh S Kamat, Emmanuel S Burgos, Frank M Raushel

Abstract read
In one paragraph

Article in Biochemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
  3. A simplified characterization ofChemical science · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Siddhesh S KamatDepartment of Chemistry, Texas A&M University , College Station, Texas 77840, United States.
Emmanuel S Burgos
Frank M Raushel
Texas A&M University · USAlbert Einstein College of Medicine · US

Funding

The Enzymology of Phosphonate MetabolismR01GM103917 · NIGMS · TEXAS A&M UNIVERSITY · PI RAUSHEL, FRANK M. · 2013 to 2016
$1.1M
NIGMS NIH HHS GM 103917NIGMS NIH HHS R01 GM103917
6 · The paper itself

Abstract

The C-P lyase complex in bacteria catalyzes the transformation of phosphonates to orthophosphate under conditions of phosphate starvation. The first committed step in the C-P lyase-catalyzed reaction is the displacement of adenine from MgATP by phosphonate substrates, yielding ribose-1-phosphonate-5-triphosphate. In the C-P lyase complex, this reaction is catalyzed by the nucleosidase PhnI and modulated by the addition of PhnG, PhnH, and PhnL. Here we describe the synthesis of Immucillin-A triphosphate, a mimic of the transition state structure for the nucleosidase reaction catalyzed by PhnI. This compound inhibits PhnI with a dissociation constant of 20 nM at pH 7.5.

Indexed as

AdenineAdenosineAdenosine TriphosphateCatalysisEscherichia coliEscherichia coli ProteinsLyasesMagnesiumModels, ChemicalOrganophosphonatesPentosephosphatesPolyphosphatesPyrrolidinesAdenineAdenosineAdenosine Triphosphatecarbon-phosphorus lyaseEscherichia coli ProteinsgalidesivirLyasesMagnesiumOrganophosphonatesPentosephosphatesPolyphosphatesPyrrolidinesribose-5-triphosphatetriphosphoric acid

Identifiers

PMID24111876
PMCPMC3838859
OpenAlexW2041338116

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.