Evidence map›Paper›PMID 24104393›Full record

ArticleProtein & cell2013

Structural basis for a homodimeric ATPase subunit of an ECF transporter.

Chengliang Chai, You Yu, Wei Zhuo, Haifeng Zhao, Xiaolu Li, Na Wang, Jijie Chai, Maojun Yang

Open access · bronzeAbstract read
In one paragraph

Article in Protein & cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. The repertoire of ABC proteins inComputational and structural biotechnology journal · 2021
    Article
  3. Article
  4. Article
  5. Article
  6. Diversity in ABC transporters: type I, II and III importers.Critical reviews in biochemistry and molecular biology
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Chengliang ChaiCollege of Biological Sciences, China Agricultural University, Beijing, 100083, China.
You Yu
Wei Zhuo
Haifeng Zhao
Xiaolu Li
Na Wang
Jijie Chai
Maojun Yang
Center for Life Sciences · CNTsinghua University · CNChina Agricultural University · CNNational Institute of Biological Sciences, Beijing · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The transition metal cobalt, an essential cofactor for many enzymes in prokaryotes, is taken up by several specific transport systems. The CbiMNQO protein complex belongs to type-1 energy-coupling factor (ECF) transporters and is a widespread group of microbial cobalt transporters. CbiO is the ATPase subunit (A-component) of the cobalt transporting system in the gram-negative thermophilic bacterium Thermoanaerobacter tengcongensis. Here we report the crystal structure of a nucleotide-free CbiO at a resolution of 2.3 Å. CbiO contains an N-terminal canonical nucleotide-binding domain (NBD) and C-terminal helical domain. Structural and biochemical data show that CbiO forms a homodimer mediated by the NBD and the C-terminal domain. Interactions mainly via conserved hydrophobic amino acids between the two C-terminal domains result in formation of a four-helix bundle. Structural comparison with other ECF transporters suggests that non-conserved residues outside the T-component binding groove in the A component likely act as a specificity determinant for T components. Together, our data provide information on understanding of the structural organization and interaction of the CbiMNQO system.

Indexed as

Catalytic DomainStructure-Activity RelationshipAdenosine TriphosphatasesAmino AcidsBiological TransportCobaltCrystallography, X-RayProtein BindingProtein ConformationProtein Structure, SecondaryThermoanaerobacterAdenosine TriphosphatasesAmino AcidsCobalt

Identifiers

PMID24104393
PMCPMC4875438
OpenAlexW1966378831

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.