Evidence map›Paper›PMID 24102597›Full record

ArticleMitochondrial DNA2015

Mitochondrial DNA diversity in the African American population.

Derek C Johnson, Sadeep Shrestha, Howard W Wiener, Robert Makowsky, Ashish Kurundkar, Craig M Wilson, Brahim Aissani

Abstract read
In one paragraph

Article in Mitochondrial DNA, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Review
  3. Community-engaged ancient DNA project reveals diverse origins of 18th-century African descendants in Charleston, South Carolina.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  4. Article
  5. Article
  6. Development of a NovelFrontiers in cellular and infection microbiology · 2019
    Article
  7. Article
  8. Article
  9. Observational
  10. Confounding by linkage disequilibrium.Journal of human genetics · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Derek C JohnsonSchool of Public Health, University of Alabama at Birmingham , Birmingham, AL , USA.
Sadeep Shrestha
Howard W Wiener
Robert Makowsky
Ashish Kurundkar
Craig M Wilson
Brahim Aissani

Funding

UAB Statistical Genetics Post-Doctoral Training ProgramT32HL072757 · NHLBI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI TIWARI, HEMANT K. · 2003 to 2016
$3.8M
ADOLESCENT MEDICINE HIV/AIDS RESEARCH NETWORKU01HD032830 · NICHD · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI MOSCICKI, ANNA-BARBARA NONE · 1994 to 2001
$352k
NHLBI NIH HHS T32 HL072757NICHD NIH HHS U01 HD032830NICHD NIH HHS U01-HD32830
6 · The paper itself

Abstract

Genetic polymorphism along mitochondrial DNA (mtDNA) defines population-specific signatures called mtDNA haplogroups. Estimation of mtDNA haplogroup distribution may be prone to errors, notably if the study sample is not drawn from a multicenter cohort. Here, we report on mtDNA diversity in a sample of African American individuals (n = 343) enrolled in a multicenter cohort. Sequencing of the hypervariable regions I and II of the D-loop control region showed that the most common mitochondrial variants are 73G, 146C, 150T, 152C, 189G, 16278T, and 16311C. In agreement with the published data, we observed 17 common mtDNA haplogroups: L0, L1, L1b, L1c, L2, L2a, L2b, L2c, L2e, L3, L3b, L3d, L3e, L3f, L3h, L3x, and L4. The most commonly observed haplogroup is L2a (19.8%), followed by L1b (10.2%). Overall, the observed mtDNA haplogroup distribution in our study is similar to those published for the African American and the African populations.

Indexed as

Genetic VariationBlack or African AmericanCohort StudiesDNA, MitochondrialGenetics, PopulationHaplotypesHumansPhylogenyPolymorphism, Single NucleotidePrincipal Component AnalysisSequence Analysis, DNADNA, MitochondrialAdmixtureAfrican AmericanmtDNA haplogrouppolymorphismREACH

Identifiers

PMID24102597
PMCPMC4048334

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.