Evidence map›Paper›PMID 24101382›Full record

ArticleThe Journal of experimental medicine2013

Antigen-loaded MR1 tetramers define T cell receptor heterogeneity in mucosal-associated invariant T cells.

Rangsima Reantragoon, Alexandra J Corbett, Isaac G Sakala, Nicholas A Gherardin, John B Furness, Zhenjun Chen, Sidonia B G Eckle, Adam P Uldrich, Richard W Birkinshaw, Onisha Patel and 10 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 378 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
378citing papers in PubMed, 1 pooled it
17.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

378 citing papers in PubMed, 1 synthesis or guideline pooled it, 586 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Mucosal-associated invariant T cells and Vδ2Clinical and experimental immunology · 2020
    Trial
  4. Article
  5. Article
  6. Select intratumoral riboflavin-auxotrophicProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Mucosal-Associated Invariant T Cells in Rheumatic Diseases.Arthritis & rheumatology (Hoboken, N.J.) · 2026
    Review
  20. Review

318 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 6 institutions in 3 countries.

Rangsima ReantragoonDepartment of Microbiology and Immunology, Peter Doherty Institute for Infection and Immunity; and 2 Department of Anatomy and Neuroscience; The University of Melbourne, Parkville, Victoria 3010, Australia.
Alexandra J Corbett
Isaac G Sakala
Nicholas A Gherardin
John B Furness
Zhenjun Chen
Sidonia B G Eckle
Adam P Uldrich
Richard W Birkinshaw
Onisha Patel
Lyudmila Kostenko
Bronwyn Meehan
Katherine Kedzierska
Ligong Liu
David P Fairlie
Ted H Hansen
Dale I Godfrey
Jamie Rossjohn
James McCluskey
Lars Kjer-Nielsen
University of Melbourne · AUPeter Doherty Institute · AUAustralian Research Council · AUUniversity of Queensland · AUWashington University in St. Louis · USMonash University · AU

Funding

MR1 BIOCHEMICAL FEATURES AND IMMUNOLOGICAL FUNCTIONSR01AI046553 · NIAID · WASHINGTON UNIVERSITY · PI FREMONT, DAVED H., HOFT, DANIEL F. · 2000 to 2014
$4.6M
NIAID NIH HHS AI046553NIAID NIH HHS R01 AI046553
6 · The paper itself

Abstract

Mucosal-associated invariant T cells (MAIT cells) express a semi-invariant T cell receptor (TCR) α-chain, TRAV1-2-TRAJ33, and are activated by vitamin B metabolites bound by the major histocompatibility complex (MHC)-related class I-like molecule, MR1. Understanding MAIT cell biology has been restrained by the lack of reagents to specifically identify and characterize these cells. Furthermore, the use of surrogate markers may misrepresent the MAIT cell population. We show that modified human MR1 tetramers loaded with the potent MAIT cell ligand, reduced 6-hydroxymethyl-8-D-ribityllumazine (rRL-6-CH₂OH), specifically detect all human MAIT cells. Tetramer(+) MAIT subsets were predominantly CD8(+) or CD4(-)CD8(-), although a small subset of CD4(+) MAIT cells was also detected. Notably, most human CD8(+) MAIT cells were CD8α(+)CD8β(-/lo), implying predominant expression of CD8αα homodimers. Tetramer-sorted MAIT cells displayed a T(H)1 cytokine phenotype upon antigen-specific activation. Similarly, mouse MR1-rRL-6-CH₂OH tetramers detected CD4(+), CD4(-)CD8(-) and CD8(+) MAIT cells in Vα19 transgenic mice. Both human and mouse MAIT cells expressed a broad TCR-β repertoire, and although the majority of human MAIT cells expressed TRAV1-2-TRAJ33, some expressed TRAJ12 or TRAJ20 genes in conjunction with TRAV1-2. Accordingly, MR1 tetramers allow precise phenotypic characterization of human and mouse MAIT cells and revealed unanticipated TCR heterogeneity in this population.

Indexed as

AnimalsAntigensCells, CulturedCrystallography, X-RayHistocompatibility Antigens Class IHumansIntestinal MucosaMiceMice, TransgenicMinor Histocompatibility AntigensMutant ProteinsNatural Killer T-CellsProtein RefoldingReceptors, Antigen, T-CellReceptors, Antigen, T-Cell, alpha-betaAntigensHistocompatibility Antigens Class IMinor Histocompatibility AntigensMR1 protein, humanMr1 protein, mouseMutant ProteinsReceptors, Antigen, T-CellReceptors, Antigen, T-Cell, alpha-beta

Identifiers

PMID24101382
PMCPMC3804952
OpenAlexW2151505523

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.