Evidence map›Paper›PMID 24100558›Full record

ArticleActa crystallographica. Section F, Structural biology and crystallization communications2013

Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of SpyCEP, a candidate antigen for a vaccine against Streptococcus pyogenes.

Francesca Abate, Enrico Malito, Fabiana Falugi, Immaculada Margarit Y Ros, Matthew James Bottomley

Open access · bronzeAbstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology and crystallization communications, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact, top 88% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Rational Design of a Glycoconjugate Vaccine against Group AInternational journal of molecular sciences · 2020
    Article
  6. Structure, dynamics and immunogenicity of a catalytically inactive CComputational and structural biotechnology journal · 2020
    Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Francesca AbateResearch Centre, Novartis Vaccines and Diagnostics, Via Fiorentina 1, 53100 Siena, Italy.
Enrico Malito
Fabiana Falugi
Immaculada Margarit Y Ros
Matthew James Bottomley
Novartis (Italy) · ITUniversity of Chicago · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Streptococcus pyogenes (Group A streptococcus; GAS) is an important human pathogen against which an effective vaccine does not yet exist. The S. pyogenes protein SpyCEP (S. pyogenes cell-envelope proteinase) is a surface-exposed subtilisin-like serine protease of 1647 amino acids. In addition to its auto-protease activity, SpyCEP is capable of cleaving interleukin 8 and related chemokines, contributing to GAS immune-evasion strategies. SpyCEP is immunogenic and confers protection in animal models of GAS infections. In order to structurally characterize this promising vaccine candidate, several SpyCEP protein-expression constructs were designed, cloned, produced in Escherichia coli, purified by affinity chromatography and subjected to crystallization trials. Crystals of a selenomethionyl form of a near-full-length SpyCEP ectodomain were obtained. The crystals diffracted X-rays to 3.3 Å resolution and belonged to space group C2, with unit-cell parameters a=139.2, b=120.4, c=104.3 Å, β=111°.

Indexed as

X-Ray DiffractionAntigens, BacterialCloning, MolecularCrystallizationCrystallography, X-RayHumansPeptide HydrolasesProtein Structure, TertiarySelenomethionineStreptococcal VaccinesStreptococcus pyogenesAntigens, BacterialPeptide HydrolasesSelenomethionineSpyCEP protein, Streptococcus pyogenesStreptococcal Vaccinesauto-proteasesGASSpyCEPStreptococcus pyogenesvaccine antigens

Identifiers

PMID24100558
PMCPMC3792666
OpenAlexW1996831248

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.