Evidence map›Paper›PMID 24100405›Full record

ArticleOrganic & biomolecular chemistry2013

Chemoenzymatic synthesis and in situ application of S-adenosyl-L-methionine analogs.

Marie Thomsen, Stine B Vogensen, Jens Buchardt, Michael D Burkart, Rasmus P Clausen

Abstract read
In one paragraph

Article in Organic & biomolecular chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
  2. Article
  3. A Vitamin BAngewandte Chemie (Weinheim an der Bergstrasse, Germany) · 2022
    Article
  4. A Vitamin BAngewandte Chemie (International ed. in English) · 2022
    Article
  5. Methyltransferases: Functions and Applications.Chembiochem : a European journal of chemical biology · 2022
    Review
  6. Article
  7. Article
  8. Article
  9. Enzymatic synthesis of fluorinated compounds.Applied microbiology and biotechnology · 2021
    Review
  10. Article
  11. From Natural Methylation to Versatile Alkylations Using Halide Methyltransferases.Chembiochem : a European journal of chemical biology · 2021
    Review
  12. Recent trends in biocatalysis.Chemical Society reviews · 2021
    Review
  13. A bicyclicRSC chemical biology · 2021
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Marie ThomsenDepartment of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, Jagtvej 162, DK-2100, Copenhagen, Denmark. rac@sund.ku.dk.
Stine B Vogensen
Jens Buchardt
Michael D Burkart
Rasmus P Clausen
University of Copenhagen · DKNovo Nordisk (Denmark) · DKUniversity of California, San Diego · US

Funding

Protein-Protein Interactions in Natural Product BiosynthesisR01GM095970 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BURKART, MICHAEL D. · 2012 to 2025
$5.9M
NIGMS NIH HHS R01 GM095970NIGMS NIH HHS R01GM095970
6 · The paper itself

Abstract

Analogs of S-adenosyl-L-methionine (SAM) are increasingly applied to the methyltransferase (MT) catalysed modification of biomolecules including proteins, nucleic acids, and small molecules. However, SAM and its analogs suffer from an inherent instability, and their chemical synthesis is challenged by low yields and difficulties in stereoisomer isolation and inhibition. Here we report the chemoenzymatic synthesis of a series of SAM analogs using wild-type (wt) and point mutants of two recently identified halogenases, SalL and FDAS. Molecular modelling studies are used to guide the rational design of mutants, and the enzymatic conversion of L-Met and other analogs into SAM analogs is demonstrated. We also apply this in situ enzymatic synthesis to the modification of a small peptide substrate by protein arginine methyltransferase 1 (PRMT1). This technique offers an attractive alternative to chemical synthesis and can be applied in situ to overcome stability and activity issues.

Indexed as

BacteriaBacterial ProteinsEnzyme ActivationModels, MolecularMolecular StructurePoint MutationS-AdenosylmethionineBacterial ProteinsS-Adenosylmethionine

Identifiers

PMID24100405
PMCPMC3871182
OpenAlexW2146146626

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.