Evidence map›Paper›PMID 24100026›Full record

ArticleThe Journal of biological chemistry2013

Glycan-dependent and -independent interactions contribute to cellular substrate recruitment by calreticulin.

Sanjeeva J Wijeyesakere, Syed M Rizvi, Malini Raghavan

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Z-αScience advances · 2022
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Dissecting physical structure of calreticulin, an intrinsically disordered CaJournal of biomolecular structure & dynamics · 2018
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Regulation of calreticulin-major histocompatibility complex (MHC) class I interactions by ATP.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  17. Article
  18. N-linked sugar-regulated protein folding and quality control in the ER.Seminars in cell & developmental biology · 2015
    Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Sanjeeva J WijeyesakereFrom the Department of Microbiology and Immunology, University of Michigan School Medical School, Ann Arbor, Michigan 48109.
Syed M Rizvi
Malini Raghavan
University of Michigan–Ann Arbor · US

Funding

PUBLIC HEALTH DEMONSTRATIONP60DK020572 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MYERS, MARTIN G · 1985 to 2012
$26.5M
Regional Pilot And Feasibility Study Grants ProgramP30DK020572 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI DAVID P OLSON · 2013 to 2026
$24.3M
INTERACTIONS &MECHANISMS OF FUNCTION OF THE TAP COMPLEXR01AI044115 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MALINI RAGHAVAN · 1999 to 2026
$9.3M
Calreticulin's functions in the adaptive immune responseR01AI066131 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RAGHAVAN, MALINI · 2007 to 2010
$1.7M
Interactions and mechanisms of function of the TAP ComplexR56AI044115 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RAGHAVAN, MALINI · 2008 to 2008
$386k
NIAID NIH HHS AI044115NIAID NIH HHS AI066131NIAID NIH HHS R01 AI044115NIAID NIH HHS R01 AI066131NIAID NIH HHS R56 AI044115NIDDK NIH HHS DK020572NIDDK NIH HHS P30 DK020572NIDDK NIH HHS P60 DK020572
6 · The paper itself

Abstract

Calreticulin is an endoplasmic reticulum chaperone with specificity for monoglucosylated glycoproteins. Calreticulin also inhibits precipitation of nonglycosylated proteins and thus contains generic protein-binding sites, but their location and contributions to substrate folding are unknown. We show that calreticulin binds glycosylated and nonglycosylated proteins with similar affinities but distinct interaction kinetics. Although both interactions involve the glycan-binding site or its vicinity, the arm-like proline-rich (P-) domain of calreticulin contributes to binding non/deglycosylated proteins. Correspondingly, ensemble FRET spectroscopy measurements indicate that glycosylated and nonglycosylated proteins induce "open" and "closed" P-domain conformations, respectively. The co-chaperone ERp57 influences substrate-binding kinetics and induces a closed P-domain conformation. Together with analysis of the interactions of calreticulin with cellular proteins, these findings indicate that the recruitment of monoglucosylated proteins to calreticulin is kinetically driven, whereas the P-domain and co-chaperone contribute to stable substrate binding. Substrate sequestration in the cleft between the glycan-binding site and P-domain is a likely mechanism for calreticulin-assisted protein folding.

Indexed as

AnimalsBinding SitesCalreticulinEndoplasmic ReticulumGlycosylationHumansImmunoglobulinsKineticsMiceModels, MolecularMolecular ChaperonesMutagenesis, Site-DirectedPolysaccharidesProtein BindingProtein ConformationProtein Disulfide-IsomerasesCalreticulinCALR protein, humanIgYImmunoglobulinsMolecular ChaperonesPdia3 protein, mousePolysaccharidesProtein Disulfide-IsomerasesRecombinant ProteinsCalreticulinEndoplasmic Reticulum (ER)ERp57Fluorescence Resonance Energy Transfer (FRET)GlycosylationMolecular ChaperoneProtein Folding

Identifiers

PMID24100026
PMCPMC3853262
OpenAlexW2061800642

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.