Evidence map›Paper›PMID 24099006›Full record

ReviewBiochimica et biophysica acta2013

Biochemical and structural insights into intramembrane metalloprotease mechanisms.

Lee Kroos, Yoshinori Akiyama

Open access · greenAbstract readReview
In one paragraph

Review in Biochimica et biophysica acta, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 59 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Inhibitory proteins ofJournal of bacteriology · 2025
    Article
  5. Cleavage cascade of the sigma regulator FecR orchestrates TonB-dependent signal transduction.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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  7. Article
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  10. Review
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  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Lee KroosDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI 48824, USA. Electronic address: kroos@msu.edu.
Yoshinori Akiyama
Kyoto University · JPMichigan State University · US

Funding

SWITCH GOVERNING BACILLUS MOTHER CELL GENE EXPRESSIONR01GM043585 · NIGMS · MICHIGAN STATE UNIVERSITY · PI KROOS, LEE R · 1995 to 2021
$4.8M
TEMPORAL AND SPATIAL GENE REGULATION--BACILLUS SUBTILISR29GM043585 · NIGMS · MICHIGAN STATE UNIVERSITY · PI KROOS, LEE R · 1990 to 1994
–
NIGMS NIH HHS GM43585NIGMS NIH HHS R01 GM043585
6 · The paper itself

Abstract

Intramembrane metalloproteases are nearly ubiquitous in living organisms and they function in diverse processes ranging from cholesterol homeostasis and the unfolded protein response in humans to sporulation, stress responses, and virulence of bacteria. Understanding how these enzymes function in membranes is a challenge of fundamental interest with potential applications if modulators can be devised. Progress is described toward a mechanistic understanding, based primarily on molecular genetic and biochemical studies of human S2P and bacterial SpoIVFB and RseP, and on the structure of the membrane domain of an archaeal enzyme. Conserved features of the enzymes appear to include transmembrane helices and loops around the active site zinc ion, which may be near the membrane surface. Extramembrane domains such as PDZ (PSD-95, DLG, ZO-1) or CBS (cystathionine-β-synthase) domains govern substrate access to the active site, but several different mechanisms of access and cleavage site selection can be envisioned, which might differ depending on the substrate and the enzyme. More work is needed to distinguish between these mechanisms, both for enzymes that have been relatively well-studied, and for enzymes lacking PDZ and CBS domains, which have not been studied. This article is part of a Special Issue entitled: Intramembrane Proteases.

Indexed as

ArabidopsisArchaeaArchaeal ProteinsBacterial ProteinsCatalytic DomainEndopeptidasesEscherichia coliEscherichia coli ProteinsGene ExpressionHumansMembrane ProteinsMetalloendopeptidasesProteolysisSignal TransductionSubstrate SpecificityArchaeal ProteinsBacterial ProteinsEndopeptidasesEscherichia coli ProteinsMBTPS2 protein, humanMembrane ProteinsMetalloendopeptidasesRseP protein, E colispoIVFB protein, Bacillus subtilisCBSCBS domain(cystathionine-β-synthase)GFPgreen fluorescent proteinIMMP(s)Intramembrane metalloproteaseintramembrane metalloprotease(s)intramembrane protease(s)IP(s)OMP(s)outer membrane protein(s)PDZPDZ domain(PSD-95, DLG, ZO-1)RNAPRNA polymeraseRsePS1PS2PSCAPsite-1 proteasesite-2 proteaseSpoIVFBSREBP-cleavage-activating proteinSREBP(s)sterol-regulatory element-binding protein(s)TMS(s)transmembrane segment(s)

Identifiers

PMID24099006
PMCPMC3793210
OpenAlexW2064923905

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.