Evidence map›Paper›PMID 24098672›Full record

ArticlePloS one2013

Drosophila morgue associates with SkpA and polyubiquitin in vivo.

Ying Zhou, Yiqin Wang, Barbara A Schreader, John R Nambu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact, top 92% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Ying ZhouDepartment of Biology, University of Massachusetts, Amherst, Massachusetts, United States of America ; Department of Biological Sciences, Florida Atlantic University, Boca Raton, Florida, United States of America.
Yiqin Wang
Barbara A Schreader
John R Nambu
University of Massachusetts Amherst · USFlorida Atlantic University · US

Funding

Mechanisms of protein turnover in apoptosisR01AG025866 · NIA · UNIVERSITY OF MASSACHUSETTS AMHERST · PI NAMBU, JOHN ROBERT · 2006 to 2009
$874k
NIA NIH HHS AG025866NIA NIH HHS R01 AG025866
6 · The paper itself

Abstract

Morgue is a unique ubiquitination protein that influences programmed cell death and circadian rhythms in Drosophila. We have found that over-expression of wild-type Morgue results in organismal lethality. This over-expression phenotype was used as the basis for an in vivo functional assay to investigate the importance of the Morgue zinc finger, F box, Ubiquitin E2 Conjugase Variant (UEV) domain, and active site Glycine residue. Removal of the zinc finger or UEV domain reduced Morgue's ability to induce lethality and enhance cell death. In contrast, lack of the F box as well as several different substitutions of the active site Glycine did not alter Morgue-induced lethality or cell death enhancement. To further characterize Morgue functions, a Flag:Morgue protein was used to isolate Morgue-associated proteins from whole adult Drosophila. Mass spectrometry analysis of the Morgue-associated proteins identified SkpA as well as a ubiquitin multimer. The identification of SkpA is consistent with previous in vitro studies and further suggests Morgue acts in an SCF-type ubiquitin E3 ligase complex. The identification of poly-ubiquitin was unexpected and this interaction had not been previously identified. The associated poly-ubiquitin was found to exhibit a Lys-48 topology, consistent with distinct functions of Morgue in proteasome-mediated protein turnover. Multiple regions of Morgue were subsequently shown to be required for poly-ubiquitin binding. Overall, Morgue is a novel multi-functional ubiquitin-binding protein.

Indexed as

AnimalsBlotting, WesternDrosophilaDrosophila ProteinsEye ProteinsF-Box MotifsImmunohistochemistryImmunoprecipitationMass SpectrometryPolyubiquitinProtein BindingSilver StainingSKP Cullin F-Box Protein LigasesUbiquitin-Protein LigasesZinc FingersDrosophila ProteinsEye Proteinsmorgue protein, DrosophilaPolyubiquitinSkpA protein, DrosophilaSKP Cullin F-Box Protein LigasesUbiquitin-Protein Ligases

Identifiers

PMID24098672
PMCPMC3787007
OpenAlexW2032186895

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.