Evidence map›Paper›PMID 24098496›Full record

ArticlePloS one2013

Leptospira interrogans serovar copenhageni harbors two lexA genes involved in SOS response.

Luciane S Fonseca, Josefa B da Silva, Juliana S Milanez, Claudia B Monteiro-Vitorello, Leonardo Momo, Zenaide M de Morais, Silvio A Vasconcellos, Marilis V Marques, Paulo L Ho, Renata M A da Costa

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.9field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Applied and environmental microbiology · 2018
    Article
  3. The sigma factor σMolecular microbiology · 2018
    Article
  4. Review
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Luciane S FonsecaCentro de Biotecnologia, Instituto Butantan, São Paulo, Brazil ; Departamento de Bioquímica, Instituto de Química, Universidade de São Paulo, São Paulo, Brazil.
Josefa B da Silva
Juliana S Milanez
Claudia B Monteiro-Vitorello
Leonardo Momo
Zenaide M de Morais
Silvio A Vasconcellos
Marilis V Marques
Paulo L Ho
Renata M A da Costa
Universidade de São Paulo · BRInstituto Butantan · BRUniversidade Federal do ABC · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacteria activate a regulatory network in response to the challenges imposed by DNA damage to genetic material, known as the SOS response. This system is regulated by the RecA recombinase and by the transcriptional repressor lexA. Leptospira interrogans is a pathogen capable of surviving in the environment for weeks, being exposed to a great variety of stress agents and yet retaining its ability to infect the host. This study aims to investigate the behavior of L. interrogans serovar Copenhageni after the stress induced by DNA damage. We show that L. interrogans serovar Copenhageni genome contains two genes encoding putative LexA proteins (lexA1 and lexA2) one of them being potentially acquired by lateral gene transfer. Both genes are induced after DNA damage, but the steady state levels of both LexA proteins drop, probably due to auto-proteolytic activity triggered in this condition. In addition, seven other genes were up-regulated following UV-C irradiation, recA, recN, dinP, and four genes encoding hypothetical proteins. This set of genes is potentially regulated by LexA1, as it showed binding to their promoter regions. All these regions contain degenerated sequences in relation to the previously described SOS box, TTTGN 5CAAA. On the other hand, LexA2 was able to bind to the palindrome TTGTAN10TACAA, found in its own promoter region, but not in the others. Therefore, the L. interrogans serovar Copenhageni SOS regulon may be even more complex, as a result of LexA1 and LexA2 binding to divergent motifs. New possibilities for DNA damage response in Leptospira are expected, with potential influence in other biological responses such as virulence.

Indexed as

Gene DosageSOS Response, GeneticsAmino Acid SequenceBacterial ProteinsBinding SitesDNA RepairGene Expression Regulation, BacterialGene OrderGenome, BacterialLeptospira interrogansLexA Repressor ProteinMolecular Sequence DataNucleotide MotifsOpen Reading FramesPhenotypePhylogenyBacterial ProteinsLexA Repressor ProteinSerine Endopeptidases

Identifiers

PMID24098496
PMCPMC3789691
OpenAlexW2008211995

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.