Evidence map›Paper›PMID 24097410›Full record

ArticleGenetics2013

Resection activity of the Sgs1 helicase alters the affinity of DNA ends for homologous recombination proteins in Saccharomyces cerevisiae.

Kara A Bernstein, Eleni P Mimitou, Michael J Mihalevic, Huan Chen, Ivana Sunjaveric, Lorraine S Symington, Rodney Rothstein

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. The many facets of homologous recombination at telomeres.Microbial cell (Graz, Austria) · 2015
    Review
  8. Sae2 promotes DNA damage resistance by removing the Mre11-Rad50-Xrs2 complex from DNA and attenuating Rad53 signaling.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  9. Article
  10. Article
  11. Article
  12. Mechanism and regulation of DNA end resection in eukaryotes.Critical reviews in biochemistry and molecular biology
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Kara A BernsteinDepartment of Genetics and Development, Columbia University Medical Center, New York, New York 10032-2704.
Eleni P Mimitou
Michael J Mihalevic
Huan Chen
Ivana Sunjaveric
Lorraine S Symington
Rodney Rothstein
Columbia University Irving Medical Center · USUniversity of Pittsburgh · US

Funding

Mechanisms of Homologous Recombination in YeastR01GM041784 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI SYMINGTON, LORRAINE S · 1989 to 2017
$7.8M
Mechanism of spontaneous and DSB-induced repairR37GM050237 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ROTHSTEIN, RODNEY J. · 2005 to 2014
$6.0M
Genetics of the formation of repair &reombination fociR01GM067055 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ROTHSTEIN, RODNEY J. · 2003 to 2014
$4.3M
MECHANISM OF SPONTANEOUS AND DSB-INDUCED REPAIRR01GM050237 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI ROTHSTEIN, RODNEY J. · 1993 to 2016
$3.0M
Break-induced replication and genome rearrangementsR01GM094386 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SYMINGTON, LORRAINE S · 2010 to 2017
$2.4M
Mechanistic insights into the SHU complex and Sgs1 in DNA repair and replicationR00GM088413 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BERNSTEIN, KARA A · 2011 to 2013
$772k
Mechanistic insights into the SHU complex and Sgs1 in DNA repair and replicationK99GM088413 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI BERNSTEIN, KARA A · 2009 to 2010
$180k
Role of Sgs1, yeast Werner/Bloom homologue in DNA repairF32GM078840 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI BERNSTEIN, KARA A · 2006 to 2009
$125k
NIGMS NIH HHS F32 GM078840NIGMS NIH HHS GM041784NIGMS NIH HHS GM078840NIGMS NIH HHS GM088413NIGMS NIH HHS GM094386NIGMS NIH HHS GM50237NIGMS NIH HHS GM67055NIGMS NIH HHS K99 GM088413NIGMS NIH HHS R00 GM088413NIGMS NIH HHS R01 GM041784NIGMS NIH HHS R01 GM050237NIGMS NIH HHS R01 GM067055NIGMS NIH HHS R01 GM094386NIGMS NIH HHS R37 GM050237
6 · The paper itself

Abstract

The RecQ helicase family is critical during DNA damage repair, and mutations in these proteins are associated with Bloom, Werner, or Rothmund-Thompson syndromes in humans, leading to cancer predisposition and/or premature aging. In the budding yeast Saccharomyces cerevisiae, mutations in the RecQ homolog, SGS1, phenocopy many of the defects observed in the human syndromes. One challenge to studying RecQ helicases is that their disruption leads to a pleiotropic phenotype. Using yeast, we show that the separation-of-function allele of SGS1, sgs1-D664Δ, has impaired activity at DNA ends, resulting in a resection processivity defect. Compromising Sgs1 resection function in the absence of the Sae2 nuclease causes slow growth, which is alleviated by making the DNA ends accessible to Exo1 nuclease. Furthermore, fluorescent microscopy studies reveal that, when Sgs1 resection activity is compromised in sae2Δ cells, Mre11 repair foci persist. We suggest a model where the role of Sgs1 in end resection along with Sae2 is important for removing Mre11 from DNA ends during repair.

Indexed as

Homologous RecombinationDNA, FungalEndodeoxyribonucleasesEndonucleasesExodeoxyribonucleasesMutationProtein BindingRecQ HelicasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsDNA, FungalEndodeoxyribonucleasesEndonucleasesexodeoxyribonuclease IExodeoxyribonucleasesMRE11 protein, S cerevisiaeRecQ HelicasesSaccharomyces cerevisiae ProteinsSAE2 protein, S cerevisiaeSGS1 protein, S cerevisiaehomologous recombinationRecQ helicasesresectionSae2Sgs1

Identifiers

PMID24097410
PMCPMC3832270
OpenAlexW2060772747

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.