Evidence map›Paper›PMID 24096387›Full record

ArticleBiostatistics (Oxford, England)2014

A conditional predictive p-value to compare a multinomial with an overdispersed multinomial in the analysis of T-cell populations.

Qinglin Pei, Cindy L Zuleger, Michael D Macklin, Mark R Albertini, Michael A Newton

Abstract read
In one paragraph

Article in Biostatistics (Oxford, England), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. SURROGATE SELECTION OVERSAMPLES EXPANDED T CELL CLONOTYPES.The annals of applied statistics · 2025
    Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Qinglin PeiDepartment of Statistics, University of Wisconsin, Madison, WI 53706, USA.
Cindy L Zuleger
Michael D Macklin
Mark R Albertini
Michael A Newton

Funding

UW COMPREHENSIVE CANCER CENTER SUPPORTP30CA014520 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI AMY TRENTHAM-DIETZ · 1985 to 2026
$142.6M
Investigative Dermatology Training Program at University of Wisconsin-MadisonT32AR055893 · NIAMS · UNIVERSITY OF WISCONSIN-MADISON · PI MUKHTAR, HASAN · 2009 to 2013
$984k
Computational Statistics for Model-Based Genomic Data IntegrationR21HG006568 · NHGRI · UNIVERSITY OF WISCONSIN-MADISON · PI NEWTON, MICHAEL A · 2012 to 2013
$356k
NCI NIH HHS P30 CA014520NHGRI NIH HHS R21 HG006568NIAMS NIH HHS T32AR055893
6 · The paper itself

Abstract

Immunological experiments that record primary molecular sequences of T-cell receptors produce moderate to high-dimensional categorical data, some of which may be subject to extra-multinomial variation caused by technical constraints of cell-based assays. Motivated by such experiments in melanoma research, we develop a statistical procedure for testing the equality of two discrete populations, where one population delivers multinomial data and the other is subject to a specific form of overdispersion. The procedure computes a conditional-predictive p-value by splitting the data set into two, obtaining a predictive distribution for one piece given the other, and using the observed predictive ordinate to generate a p-value. The procedure has a simple interpretation, requires fewer modeling assumptions than would be required of a fully Bayesian analysis, and has reasonable operating characteristics as evidenced empirically and by asymptotic analysis.

Indexed as

Data Interpretation, StatisticalModels, StatisticalCell ProliferationComplementarity Determining RegionsHumansMutationReceptors, Antigen, T-CellSequence Analysis, DNAT-LymphocytesComplementarity Determining RegionsReceptors, Antigen, T-CellBayesian p-valueDirichlet multinomialDouble overdispersionFisher's exact testHPRT assayMass culture experimentsMolecular sequence dataT-cell receptor

Identifiers

PMID24096387
PMCPMC3862212

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.