ArticleBMC plant biology2013
Transcriptome analyses of a Chinese hazelnut species Corylus mandshurica.
Article in BMC plant biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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12 citing papers in PubMed, 25 citations in OpenAlex.
- Species delimitation and hybridization history of a hazel species complex.Annals of botany · 2021Article
- Discovery of putative capsaicin biosynthetic genes by RNA-Seq and digital gene expression analysis of pepper.Scientific reports · 2016Article
- Genome wide transcriptome profiling reveals differential gene expression in secondary metabolite pathway of Cymbopogon winterianus.Scientific reports · 2016Article
- Comparative Analysis of the Chrysanthemum Leaf Transcript Profiling in Response to Salt Stress.PloS one · 2016Article
- A transcriptomic analysis of bermudagrass (Cynodon dactylon) provides novel insights into the basis of low temperature tolerance.BMC plant biology · 2015Article
- The transcriptome of Utricularia vulgaris, a rootless plant with minimalist genome, reveals extreme alternative splicing and only moderate sequence similarity with Utricularia gibba.BMC plant biology · 2015Article
- Expression and Functional Analysis of WRKY Transcription Factors in Chinese Wild Hazel, Corylus heterophylla Fisch.PloS one · 2015Article
- Transcriptome analysis of the Capra hircus ovary.PloS one · 2015Article
- Transcriptome analysis and gene expression profiling of abortive and developing ovules during fruit development in hazelnut.PloS one · 2015Article
- Exploring triacylglycerol biosynthetic pathway in developing seeds of Chia (Salvia hispanica L.): a transcriptomic approach.PloS one · 2015Article
- Endophytic and epiphytic microbes as "sources" of bioactive agents.Frontiers in chemistry · 2015Review
- A transcriptomic analysis of Chrysanthemum nankingense provides insights into the basis of low temperature tolerance.BMC genomics · 2014Article
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5 authors at 1 institution in 1 country.
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Abstract
backgroundCorylus was renowned for its production of hazelnut and taxol. To understand the local adaptation of Chinese species and speed up breeding efforts in China, we analyzed the leaf transcriptome of Corylus mandshurica, which had a high tolerance to fungal infections and cold.
resultsA total of 12,255,030 clean pair-end reads were generated and then assembled into 37,846 Expressed Sequence Tag (EST) sequences. During functional annotation, 26,565 ESTs were annotated with Gene Ontology (GO) terms using Blast2go and 11,056 ESTs were grouped into the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways using KEGG Automatic Annotation Server (KAAS). We identified 45 ESTs that were homologous to enzymes and transcription factors responsible for taxol synthesis. The most differentiated orthologs between C. mandshurica and a European congener, C. avellana, were enriched in stress tolerance to fungal resistance and cold.
conclusionsIn this study, we detected a set of genes related to taxol synthesis in a taxol-producing angiosperm species for the first time and found a close relationship between most differentiated genes and different adaptations to fungal infection and cold in C. mandshurica and C. avellana. These findings provided tools to improve our understanding of local adaptation, genetic breeding and taxol production in hazelnut.
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