Evidence map›Paper›PMID 24092409›Full record

ArticleScientific reports2013

A new protein-protein interaction sensor based on tripartite split-GFP association.

Stéphanie Cabantous, Hau B Nguyen, Jean-Denis Pedelacq, Faten Koraïchi, Anu Chaudhary, Kumkum Ganguly, Meghan A Lockard, Gilles Favre, Thomas C Terwilliger, Geoffrey S Waldo

Abstract read
In one paragraph

Article in Scientific reports, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 137 papers.

0numbers the graph read from it
0cells of the map it votes in
137citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

137 citing papers in PubMed.

  1. A Generative Neuro-Symbolic AI for Protein Sequence Design.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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  4. Endocytic Control of Cell-Autonomous and Non-Cell-Autonomous Functions of p53.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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  15. Methods for Controlling Small GTPase Activity.Chembiochem : a European journal of chemical biology · 2025
    Review
  16. Unveiling the invisible genomic dynamics.Experimental & molecular medicine · 2025
    Review
  17. Split genetically encoded calcium indicators for interorganellar junctions.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  18. Article
  19. Review
  20. Article

77 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Stéphanie CabantousINSERM UMR1037, Cancer Research Center of Toulouse, Université de Toulouse, Institut Claudius Regaud, F-31052 Toulouse, France.
Hau B Nguyen
Jean-Denis Pedelacq
Faten Koraïchi
Anu Chaudhary
Kumkum Ganguly
Meghan A Lockard
Gilles Favre
Thomas C Terwilliger
Geoffrey S Waldo

Funding

Subproject 5U54GM074946 · NIGMS · UNIVERSITY OF CALIF-LOS ALAMOS NAT LAB · PI TERWILLIGER, THOMAS C. · 2005 to 2009
$20.2M
Proj 3: Enhancing crystallization by supplying natural binding partnersP01GM098177 · NIGMS · LOS ALAMOS NAT SECTY-LOS ALAMOS NAT LAB · PI BRADBURY, ANDREW, EISENBERG, DAVID · 2012 to 2015
$4.7M
NIGMS NIH HHS 1 U54GM074946-01NIGMS NIH HHS P01 GM098177NIGMS NIH HHS U54 GM074946
6 · The paper itself

Abstract

Monitoring protein-protein interactions in living cells is key to unraveling their roles in numerous cellular processes and various diseases. Previously described split-GFP based sensors suffer from poor folding and/or self-assembly background fluorescence. Here, we have engineered a micro-tagging system to monitor protein-protein interactions in vivo and in vitro. The assay is based on tripartite association between two twenty amino-acids long GFP tags, GFP10 and GFP11, fused to interacting protein partners, and the complementary GFP1-9 detector. When proteins interact, GFP10 and GFP11 self-associate with GFP1-9 to reconstitute a functional GFP. Using coiled-coils and FRB/FKBP12 model systems we characterize the sensor in vitro and in Escherichia coli. We extend the studies to mammalian cells and examine the FK-506 inhibition of the rapamycin-induced association of FRB/FKBP12. The small size of these tags and their minimal effect on fusion protein behavior and solubility should enable new experiments for monitoring protein-protein association by fluorescence.

Indexed as

Protein Interaction MappingRecombinant ProteinsAnimalsCell LineEscherichia coliGene ExpressionGene OrderGenetic VectorsGreen Fluorescent ProteinsHumansMolecular ImagingMutationProtein BindingProtein EngineeringProtein MultimerizationProtein Structure, SecondaryGreen Fluorescent ProteinsRecombinant ProteinsTacrolimus Binding Proteins

Identifiers

PMID24092409
PMCPMC3790201

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.