Evidence map›Paper›PMID 24092330›Full record

ArticleHuman molecular genetics2014

The role of the mitochondrial ribosome in human disease: searching for mutations in 12S mitochondrial rRNA with high disruptive potential.

Paul M Smith, Joanna L Elson, Laura C Greaves, Saskia B Wortmann, Richard J T Rodenburg, Robert N Lightowlers, Zofia M A Chrzanowska-Lightowlers, Robert W Taylor, Antón Vila-Sanjurjo

Abstract read
In one paragraph

Article in Human molecular genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Changes inBiomedicines · 2024
    Article
  5. Article
  6. Human mtDNA-Encoded Long ncRNAs: Knotty Molecules and Complex Functions.International journal of molecular sciences · 2024
    Review
  7. Article
  8. Review
  9. Article
  10. Mitochondrial ribosomal stress in lung diseases.American journal of physiology. Lung cellular and molecular physiology · 2022
    Review
  11. Article
  12. Review
  13. Article
  14. Improved detection of mitochondrial DNA instability in mitochondrial genome maintenance disorders.Genetics in medicine : official journal of the American College of Medical Genetics · 2021
    Article
  15. Review
  16. The Diseased Mitoribosome.FEBS letters · 2021
    Review
  17. Article
  18. Intimate Relations-Mitochondria and Ageing.International journal of molecular sciences · 2020
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Paul M SmithInstitute of Medical Sciences, Ninewells Hospital and Medical School, Dundee University, Dundee DD1 9SY, Scotland, UK.
Joanna L Elson
Laura C Greaves
Saskia B Wortmann
Richard J T Rodenburg
Robert N Lightowlers
Zofia M A Chrzanowska-Lightowlers
Robert W Taylor
Antón Vila-Sanjurjo

Funding

Biotechnology and Biological Sciences Research CouncilMedical Research Council G0700718Medical Research Council MR/K000608/1Wellcome Trust 096919Wellcome Trust 096919/Z/11/Z
6 · The paper itself

Abstract

Mutations of mitochondrial DNA are linked to many human diseases. Despite the identification of a large number of variants in the mitochondrially encoded rRNA (mt-rRNA) genes, the evidence supporting their pathogenicity is, at best, circumstantial. Establishing the pathogenicity of these variations is of major diagnostic importance. Here, we aim to estimate the disruptive effect of mt-rRNA variations on the function of the mitochondrial ribosome. In the absence of direct biochemical methods to study the effect of mt-rRNA variations, we relied on the universal conservation of the rRNA fold to infer their disruptive potential. Our method, named heterologous inferential analysis or HIA, combines conservational information with functional and structural data obtained from heterologous ribosomal sources. Thus, HIA's predictive power is superior to the traditional reliance on simple conservation indexes. By using HIA, we have been able to evaluate the disruptive potential for a subset of uncharacterized 12S mt-rRNA variations. Our analysis revealed the existence of variations in the rRNA component of the human mitoribosome with different degrees of disruptive power. In cases where sufficient information regarding the genetic and pathological manifestation of the mitochondrial phenotype is available, HIA data can be used to predict the pathogenicity of mt-rRNA mutations. In other cases, HIA analysis will allow the prioritization of variants for additional investigation. Eventually, HIA-inspired analysis of potentially pathogenic mt-rRNA variations, in the context of a scoring system specifically designed for these variants, could lead to a powerful diagnostic tool.

Indexed as

Computer SimulationConserved SequenceDNA Mutational AnalysisGenetic Association StudiesHumansModels, MolecularMutationNeoplasmsNucleic Acid ConformationRNARNA, MitochondrialRNA, RibosomalRNARNA, MitochondrialRNA, RibosomalRNA, ribosomal, 12S

Identifiers

PMID24092330
PMCPMC3900107

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.