Evidence map›Paper›PMID 24088064›Full record

ReviewCritical reviews in biochemistry and molecular biology

The Mediator complex and transcription regulation.

Zachary C Poss, Christopher C Ebmeier, Dylan J Taatjes

Open access · bronzeAbstract readReview
In one paragraph

Review in Critical reviews in biochemistry and molecular biology. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 211 papers.

0numbers the graph read from it
0cells of the map it votes in
211citing papers in PubMed
15.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

211 citing papers in PubMed, 359 citations in OpenAlex.

  1. Review
  2. The molecular basis of transcription initiation by RNA polymerase II.Nature reviews. Molecular cell biology · 2026
    Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Identification of Virus-Host Interactions.Advances in experimental medicine and biology · 2026
    Review
  12. Article
  13. Article
  14. Unique Role of Med8 in Ace2 Recruitment and Target Gene Expression inJournal of microbiology and biotechnology · 2025
    Article
  15. Article
  16. Review
  17. Article
  18. iScience · 2025
    Article
  19. Article
  20. Article

151 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Zachary C PossDepartment of Chemistry and Biochemistry, University of Colorado , Boulder, CO , USA.
Christopher C Ebmeier
Dylan J Taatjes
University of Colorado Boulder · US

Funding

TRAINING IN SIGNAL TRANSDUCTION &CELL CYCLE REGULATIONT32GM008759 · NIGMS · UNIVERSITY OF COLORADO AT BOULDER · PI AHN, NATALIE G. · 2000 to 2020
$5.9M
Predoctoral Training Program in Signaling and Cellular Regulation INCLUDE Down Syndrome SupplementT32GM142607 · NIGMS · UNIVERSITY OF COLORADO · PI Sabrina Leigh Spencer, Tin Tin Su · 2021 to 2026
$3.6M
Directing the Mediator Complex: Bivalent approaches to Reconstituting or InhibitiR01CA170741 · NCI · YALE UNIVERSITY · PI SCHEPARTZ, ALANNA, TAATJES, DYLAN J · 2012 to 2016
$1.9M
Mechanistic Studies of Mediator and the p53 Tumor SuppressorR01CA127364 · NCI · UNIVERSITY OF COLORADO · PI TAATJES, DYLAN J · 2007 to 2011
$1.1M
Mapping the Dynamic Architecture of the Human Mediator ComplexR21CA175849 · NCI · INSTITUTE FOR SYSTEMS BIOLOGY · PI RANISH, JEFFREY A, TAATJES, DYLAN J · 2013 to 2014
$385k
Characterization and regulation of the MED17-p53 binding interface.F31CA180419 · NCI · UNIVERSITY OF COLORADO · PI POSS, ZACHARY C. · 2013 to 2014
$62k
NCI NIH HHS CA127364NCI NIH HHS CA170741NCI NIH HHS CA175849NCI NIH HHS F31 CA180419NCI NIH HHS R01 CA127364NCI NIH HHS R21 CA175849NIGMS NIH HHS T32 GM008759NIGMS NIH HHS T32 GM142607
6 · The paper itself

Abstract

The Mediator complex is a multi-subunit assembly that appears to be required for regulating expression of most RNA polymerase II (pol II) transcripts, which include protein-coding and most non-coding RNA genes. Mediator and pol II function within the pre-initiation complex (PIC), which consists of Mediator, pol II, TFIIA, TFIIB, TFIID, TFIIE, TFIIF and TFIIH and is approximately 4.0 MDa in size. Mediator serves as a central scaffold within the PIC and helps regulate pol II activity in ways that remain poorly understood. Mediator is also generally targeted by sequence-specific, DNA-binding transcription factors (TFs) that work to control gene expression programs in response to developmental or environmental cues. At a basic level, Mediator functions by relaying signals from TFs directly to the pol II enzyme, thereby facilitating TF-dependent regulation of gene expression. Thus, Mediator is essential for converting biological inputs (communicated by TFs) to physiological responses (via changes in gene expression). In this review, we summarize an expansive body of research on the Mediator complex, with an emphasis on yeast and mammalian complexes. We focus on the basics that underlie Mediator function, such as its structure and subunit composition, and describe its broad regulatory influence on gene expression, ranging from chromatin architecture to transcription initiation and elongation, to mRNA processing. We also describe factors that influence Mediator structure and activity, including TFs, non-coding RNAs and the CDK8 module.

Indexed as

Gene Expression RegulationAnimalsChromatinCyclin-Dependent Kinase 8Gene ExpressionMediator ComplexProtein BiosynthesisRNA Polymerase IISaccharomyces cerevisiaeTranscriptional ActivationTranscription FactorsTranscription, GeneticCDK8 protein, humanChromatinCyclin-Dependent Kinase 8Mediator ComplexRNA Polymerase IITranscription Factors

Identifiers

PMID24088064
PMCPMC3852498
OpenAlexW2032015210

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.