Evidence map›Paper›PMID 24086273›Full record

ArticlePloS one2013

Commensal microbiota contributes to chronic endocarditis in TAX1BP1 deficient mice.

Satoko Nakano, Emi Ikebe, Yoshiyuki Tsukamoto, Yan Wang, Takashi Matsumoto, Takahiro Mitsui, Takaaki Yahiro, Kunimitsu Inoue, Hiroaki Kawazato, Aiko Yasuda and 12 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.3field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
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  6. Selective Autophagy and Xenophagy in Infection and Disease.Frontiers in cell and developmental biology · 2018
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 4 institutions in 2 countries.

Satoko NakanoDepartment of Microbiology, Faculty of Medicine, Oita University, Yufu, Oita, Japan ; Department of Ophthalmology, Faculty of Medicine, Oita University, Yufu, Oita, Japan.
Emi Ikebe
Yoshiyuki Tsukamoto
Yan Wang
Takashi Matsumoto
Takahiro Mitsui
Takaaki Yahiro
Kunimitsu Inoue
Hiroaki Kawazato
Aiko Yasuda
Kanako Ito
Shigeo Yokoyama
Naohiko Takahashi
Mitsuo Hori
Tatsuo Shimada
Masatsugu Moriyama
Toshiaki Kubota
Katsushige Ono
Wataru Fujibuchi
Kuan-Teh Jeang
Hidekatsu Iha
Akira Nishizono
Oita University · JPIbaraki Prefectural Central Hospital · JPKyoto University · JPNational Institute of Allergy and Infectious Diseases · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tax1-binding protein 1 (Tax1bp1) negatively regulates NF-κB by editing the ubiquitylation of target molecules by its catalytic partner A20. Genetically engineered TAX1BP1-deficient (KO) mice develop age-dependent inflammatory constitutions in multiple organs manifested as valvulitis or dermatitis and succumb to premature death. Laser capture dissection and gene expression microarray analysis on the mitral valves of TAX1BP1-KO mice (8 and 16 week old) revealed 588 gene transcription alterations from the wild type. SAA3 (serum amyloid A3), CHI3L1, HP, IL1B and SPP1/OPN were induced 1,180-, 361-, 187-, 122- and 101-fold respectively. WIF1 (Wnt inhibitory factor 1) exhibited 11-fold reduction. Intense Saa3 staining and significant I-κBα reduction were reconfirmed and massive infiltration of inflammatory lymphocytes and edema formation were seen in the area. Antibiotics-induced 'germ free' status or the additional MyD88 deficiency significantly ameliorated TAX1BP1-KO mice's inflammatory lesions. These pathological conditions, as we named 'pseudo-infective endocarditis' were boosted by the commensal microbiota who are usually harmless by their nature. This experimental outcome raises a novel mechanistic linkage between endothelial inflammation caused by the ubiquitin remodeling immune regulators and fatal cardiac dysfunction.

Indexed as

MicrobiotaAnimalsAnti-Bacterial AgentsBase SequenceChronic DiseaseDNA PrimersEndocarditisEnzyme-Linked Immunosorbent AssayGene Expression ProfilingIntracellular Signaling Peptides and ProteinsMiceMice, KnockoutMyeloid Differentiation Factor 88Neoplasm ProteinsReal-Time Polymerase Chain ReactionAnti-Bacterial AgentsDNA PrimersIntracellular Signaling Peptides and ProteinsMyd88 protein, mouseMyeloid Differentiation Factor 88Neoplasm ProteinsTAX1BP1 protein, mouse

Identifiers

PMID24086273
PMCPMC3785488
OpenAlexW2025427517

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.