Evidence map›Paper›PMID 24086124›Full record

ArticlePLoS computational biology2013

Barcoding T cell calcium response diversity with methods for automated and accurate analysis of cell signals (MAAACS).

Audrey Salles, Cyrille Billaudeau, Arnauld Sergé, Anne-Marie Bernard, Marie-Claire Phélipot, Nicolas Bertaux, Mathieu Fallet, Pierre Grenot, Didier Marguet, Hai-Tao He and 1 more

Abstract read
In one paragraph

Article in PLoS computational biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

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  19. CalQuoScientific reports · 2017
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Audrey SallesCentre d'Immunologie de Marseille-Luminy (CIML), Aix-Marseille University, UM2, Marseille, France ; Institut National de la Santé et de la Recherche Médicale (Inserm), U1104, Marseille, France ; Centre National de la Recherche Scientifique (CNRS) UMR7280, Marseille, France.
Cyrille Billaudeau
Arnauld Sergé
Anne-Marie Bernard
Marie-Claire Phélipot
Nicolas Bertaux
Mathieu Fallet
Pierre Grenot
Didier Marguet
Hai-Tao He
Yannick Hamon

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We introduce a series of experimental procedures enabling sensitive calcium monitoring in T cell populations by confocal video-microscopy. Tracking and post-acquisition analysis was performed using Methods for Automated and Accurate Analysis of Cell Signals (MAAACS), a fully customized program that associates a high throughput tracking algorithm, an intuitive reconnection routine and a statistical platform to provide, at a glance, the calcium barcode of a population of individual T-cells. Combined with a sensitive calcium probe, this method allowed us to unravel the heterogeneity in shape and intensity of the calcium response in T cell populations and especially in naive T cells, which display intracellular calcium oscillations upon stimulation by antigen presenting cells.

Indexed as

Signal TransductionSoftwareAnimalsCalciumChlorocebus aethiopsCOS CellsHumansMolecular ProbesT-LymphocytesCalciumMolecular Probes

Identifiers

PMID24086124
PMCPMC3784497

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.