Evidence map›Paper›PMID 24081331›Full record

ArticleMolecular and cellular biology2013

The yeast AMPK homolog SNF1 regulates acetyl coenzyme A homeostasis and histone acetylation.

Man Zhang, Luciano Galdieri, Ales Vancura

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 81 citations in OpenAlex.

  1. Article
  2. Review
  3. The plant epigenome governed by nutrients and metabolism.Current opinion in plant biology · 2025
    Review
  4. Article
  5. Advances inJournal of fungi (Basel, Switzerland) · 2023
    Review
  6. Article
  7. Article
  8. Review
  9. Review
  10. Adaptive Response ofJournal of fungi (Basel, Switzerland) · 2022
    Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Reciprocal Regulation of AMPK/SNF1 and Protein Acetylation.International journal of molecular sciences · 2018
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 2 countries.

Man ZhangDepartment of Biological Sciences, St. John's University, Queens, New York, USA.
Luciano Galdieri
Ales Vancura
St. John's University · US

Funding

Intermediary Metabolism, Histone Acetylation, and Transcriptional RegulationR15GM106324 · NIGMS · ST. JOHN'S UNIVERSITY · PI VANCURA, ALES · 2013 to 2013
$377k
NIGMS NIH HHS GM106324NIGMS NIH HHS R15 GM106324
6 · The paper itself

Abstract

Acetyl coenzyme A (acetyl-CoA) is a key metabolite at the crossroads of metabolism, signaling, chromatin structure, and transcription. Concentration of acetyl-CoA affects histone acetylation and links intermediary metabolism and transcriptional regulation. Here we show that SNF1, the budding yeast ortholog of the mammalian AMP-activated protein kinase (AMPK), plays a role in the regulation of acetyl-CoA homeostasis and global histone acetylation. SNF1 phosphorylates and inhibits acetyl-CoA carboxylase, which catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, the first and rate-limiting reaction in the de novo synthesis of fatty acids. Inactivation of SNF1 results in a reduced pool of cellular acetyl-CoA, globally decreased histone acetylation, and reduced fitness and stress resistance. The histone acetylation and transcriptional defects can be partially suppressed and the overall fitness improved in snf1Δ mutant cells by increasing the cellular concentration of acetyl-CoA, indicating that the regulation of acetyl-CoA homeostasis represents another mechanism in the SNF1 regulatory repertoire.

Indexed as

Protein Processing, Post-TranslationalAcetylationAcetyl Coenzyme AAcetyltransferasesChromatinCoenzyme A LigasesDNA, FungalDNA, IntergenicEpigenetic RepressionGene Expression Regulation, FungalGene Knockout TechniquesHistone AcetyltransferasesHistone DeacetylasesHistonesHomeostasisMalonyl Coenzyme AAcetyl Coenzyme AAcetyltransferasesAcsl1 protein, rataminoglycoside N1-acetyltransferaseChromatinCoenzyme A LigasesDNA, FungalDNA, IntergenicHistone AcetyltransferasesHistone DeacetylasesHistonesMalonyl Coenzyme AProtein Serine-Threonine KinasesSNF1-related protein kinases

Identifiers

PMID24081331
PMCPMC3838016
OpenAlexW2146748825

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.