Evidence map›Paper›PMID 24080187›Full record

ArticlePsychoneuroendocrinology2013

Genome-wide association study implicates a novel RNA gene, the lincRNA AC068718.1, as a risk factor for post-traumatic stress disorder in women.

Guia Guffanti, Sandro Galea, Lulu Yan, Andrea L Roberts, Nadia Solovieff, Allison E Aiello, Jordan W Smoller, Immaculata De Vivo, Hardeep Ranu, Monica Uddin and 3 more

Abstract read
In one paragraph

Article in Psychoneuroendocrinology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed, 3 pooled it
19.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 3 syntheses or guidelines pooled it, 121 citations in OpenAlex.

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  20. DNA methylation correlates of PTSD: Recent findings and technical challenges.Progress in neuro-psychopharmacology & biological psychiatry · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 1 country.

Guia GuffantiDepartment of Psychiatry, Columbia University, New York State Psychiatric Institute, New York, NY, USA.
Sandro Galea
Lulu Yan
Andrea L Roberts
Nadia Solovieff
Allison E Aiello
Jordan W Smoller
Immaculata De Vivo
Hardeep Ranu
Monica Uddin
Derek E Wildman
Shaun Purcell
Karestan C Koenen
Harvard University · USColumbia University · USBroad Institute · USWayne State University · USNew York State Psychiatric InstituteUniversity of Michigan–Ann Arbor · US

Funding

Risk Factors for Breast Cancer in Younger NursesR01CA050385 · NCI · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI ELIASSEN, A. HEATHER, WILLETT, WALTER C. · 1989 to 2019
$32.3M
Ecologic Stressors, PTSD, and Drug Use in DetroitR01DA022720 · NIDA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI AIELLO, ALLISON E · 2007 to 2011
$4.7M
Genetic Determinants of PTSD in WomenR01MH078928 · NIMH · HARVARD SCHOOL OF PUBLIC HEALTH · PI KOENEN, KARESTAN C · 2007 to 2010
$2.9M
The Cross-National Epidemiology of Trauma Exposure and PTSDR01MH093612 · NIMH · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI KOENEN, KARESTAN C · 2011 to 2013
$2.0M
Candidate Epigenetic Biomarkers For PTSD: Insights From DetroitRC1MH088283 · NIMH · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI AIELLO, ALLISON E · 2009 to 2010
$995k
Research and Mentoring on Integrating Psychiatric Genetics and NeuroscienceK24MH094614 · NIMH · MASSACHUSETTS GENERAL HOSPITAL · PI SMOLLER, JORDAN W · 2012 to 2016
$925k
NCI NIH HHS CA50385NCI NIH HHS R01 CA050385NIDA NIH HHS DA022720NIDA NIH HHS DA 022720-S1NIDA NIH HHS R01 DA022720NIMH NIH HHS K24 MH094614NIMH NIH HHS MH078928NIMH NIH HHS MH 088283NIMH NIH HHS R01 MH078928NIMH NIH HHS R01 MH093612NIMH NIH HHS RC1 MH088283
6 · The paper itself

Abstract

Posttraumatic stress disorder (PTSD) is a common and debilitating mental disorder with a particularly high burden for women. Emerging evidence suggests PTSD may be more heritable among women and evidence from animal models and human correlational studies suggest connections between sex-linked biology and PTSD vulnerability, which may extend to the disorder's genetic architecture. We conducted a genome-wide association study (GWAS) of PTSD in a primarily African American sample of women from the Detroit Neighborhood Health Study (DNHS) and tested for replication in an independent cohort of primarily European American women from the Nurses Health Study II (NHSII). We genotyped 413 DNHS women - 94 PTSD cases and 319 controls exposed to at least one traumatic event - on the Illumina HumanOmniExpress BeadChip for >700,000 markers and tested 578 PTSD cases and 1963 controls from NHSII for replication. We performed a network-based analysis integrating data from GWAS-derived independent regions of association and the Reactome database of functional interactions. We found genome-wide significant association for one marker mapping to a novel RNA gene, lincRNA AC068718.1, for which we found suggestive evidence of replication in NHSII. Our network-based analysis indicates that our top GWAS results were enriched for pathways related to telomere maintenance and immune function. Our findings implicate a novel RNA gene, lincRNA AC068718.1, as risk factor for PTSD in women and add to emerging evidence that non-coding RNA genes may play a crucial role in shaping the landscape of gene regulation with putative pathological effects that lead to phenotypic differences.

Indexed as

Black or African AmericanCase-Control StudiesEducational StatusFemaleGene FrequencyGenome-Wide Association StudyGenotypeHumansMarital StatusMichiganMiddle AgedPolymorphism, Single NucleotideRisk FactorsRNARNA, Long NoncodingSocioeconomic FactorsRNARNA, Long NoncodingGWASImmune systemlincRNAPTSDTelomere maintenance

Identifiers

PMID24080187
PMCPMC3844079
OpenAlexW2127957059

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.