Evidence map›Paper›PMID 24078887›Full record

ArticleMolecular & cellular proteomics : MCP2013

Archaeal signal transduction: impact of protein phosphatase deletions on cell size, motility, and energy metabolism in Sulfolobus acidocaldarius.

Julia Reimann, Dominik Esser, Alvaro Orell, Fabian Amman, Trong Khoa Pham, Josselin Noirel, Ann-Christin Lindås, Rolf Bernander, Phillip C Wright, Bettina Siebers and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 63 citations in OpenAlex.

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  17. The Impact of Pyroglutamate:Archaea (Vancouver, B.C.) · 2019
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  20. Archaeal biofilm formation.Nature reviews. Microbiology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 4 countries.

Julia ReimannMolecular Biology of Archaea, Max Planck Institute for terrestrial Microbiology, Karl-von-Frisch Straβe 10, 35043 Marburg, Germany;
Dominik Esser
Alvaro Orell
Fabian Amman
Trong Khoa Pham
Josselin Noirel
Ann-Christin Lindås
Rolf Bernander
Phillip C Wright
Bettina Siebers
Sonja-Verena Albers
Max Planck Institute for Terrestrial Microbiology · DEUniversity of Sheffield · GBStockholm University · SEUniversity of Duisburg-Essen · DEUniversity of Vienna · AT

Funding

Biotechnology and Biological Sciences Research Council BB/F003420/1
6 · The paper itself

Abstract

In this study, the in vitro and in vivo functions of the only two identified protein phosphatases, Saci-PTP and Saci-PP2A, in the crenarchaeal model organism Sulfolobus acidocaldarius were investigated. Biochemical characterization revealed that Saci-PTP is a dual-specific phosphatase (against pSer/pThr and pTyr), whereas Saci-PP2A exhibited specific pSer/pThr activity and inhibition by okadaic acid. Deletion of saci_pp2a resulted in pronounced alterations in growth, cell shape and cell size, which could be partially complemented. Transcriptome analysis of the three strains (Δsaci_ptp, Δsaci_pp2a and the MW001 parental strain) revealed 155 genes that were differentially expressed in the deletion mutants, and showed significant changes in expression of genes encoding the archaella (archaeal motility structure), components of the respiratory chain and transcriptional regulators. Phosphoproteome studies revealed 801 unique phosphoproteins in total, with an increase in identified phosphopeptides in the deletion mutants. Proteins from most functional categories were affected by phosphorylation, including components of the motility system, the respiratory chain, and regulatory proteins. In the saci_pp2a deletion mutant the up-regulation at the transcript level, as well as the observed phosphorylation pattern, resembled starvation stress responses. Hypermotility was also observed in the saci_pp2a deletion mutant. The results highlight the importance of protein phosphorylation in regulating essential cellular processes in the crenarchaeon S. acidocaldarius.

Indexed as

Gene Expression Regulation, ArchaealArchaeal ProteinsElectron TransportEnergy MetabolismGene DeletionGene Expression ProfilingIsoenzymesKineticsMolecular Sequence AnnotationMovementPhosphoproteinsPhosphorylationProtein Phosphatase 2Signal TransductionSulfolobus acidocaldariusTranscriptomeArchaeal ProteinsIsoenzymesPhosphoproteinsProtein Phosphatase 2

Identifiers

PMID24078887
PMCPMC3861733
OpenAlexW2097213512

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.