Evidence map›Paper›PMID 24077349›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2013

Promoter hypomethylation of EpCAM-regulated bone morphogenetic protein gene family in recurrent endometrial cancer.

Ya-Ting Hsu, Fei Gu, Yi-Wen Huang, Joseph Liu, Jianhua Ruan, Rui-Lan Huang, Chiou-Miin Wang, Chun-Liang Chen, Rohit R Jadhav, Hung-Cheng Lai and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 39 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. Tumor Promoting Effect of BMP Signaling in Endometrial Cancer.International journal of molecular sciences · 2021
    Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Shedding light on the EpCAM: An overview.Journal of cellular physiology · 2019
    Review
  15. Article
  16. Review
  17. miR-137 is a tumor suppressor in endometrial cancer and is repressed by DNA hypermethylation.Laboratory investigation; a journal of technical methods and pathology · 2018
    Article
  18. DNA methylation in lung tissues of mouse offspring exposed in utero to polycyclic aromatic hydrocarbons.Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association · 2017
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 2 countries.

Ya-Ting HsuAuthors' Affiliations: Department of Molecular Medicine, Institute of Biotechnology; Department of Urology; Cancer Therapy and Research Center, University of Texas Health Science Center at San Antonio; Department of Computer Science, University of Texas at San Antonio, San Antonio, Texas; Department of Obstetrics and Gynecology, Medical College of Wisconsin, Milwaukee, Wisconsin; Department of Obstetrics and Gynecology, Tri-Service General Hospital; Laboratory of Epigenetics, Cancer Stem Cells; Department and Graduate Institute of Biochemistry, National Defense Medical Center, Taiwan, Republic of China; Department of Obstetrics and Gynecology, Siteman Cancer Center, Washington University School of Medicine, St. Louis, Missouri; Department of Obstetrics and Gynecology, Ohio State University, Columbus, Ohio.
Fei Gu
Yi-Wen Huang
Joseph Liu
Jianhua Ruan
Rui-Lan Huang
Chiou-Miin Wang
Chun-Liang Chen
Rohit R Jadhav
Hung-Cheng Lai
David G Mutch
Paul J Goodfellow
Ian M Thompson
Nameer B Kirma
Tim Hui-Ming Huang
The Ohio State University · USMedical College of Wisconsin · USNational Defense Medical Center · TWThe University of Texas at San Antonio · USTri-Service General Hospital · TWThe University of Texas Health Science Center at San Antonio · US

Funding

TISSUE CULTURE---COREP30CA054174 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Lei Zheng · 1991 to 2026
$59.1M
Institute for Integration of Medicine & Science: A Partnership to Improve HealthUL1TR001120 · NCATS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI CLARK, ROBERT A, HARGREAVES, KENNETH M · 2013 to 2017
$16.5M
Predicting Drug Resistance in Cancer Genomes by DMA Methylation ProfilingU54CA113001 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI HUANG, TIM H.-M. · 2004 to 2014
$16.1M
Tissue and Pathology CoreP50CA134254 · NCI · WASHINGTON UNIVERSITY · PI POLLOCK, PAMELA M, POWELL, MATTHEW A · 2009 to 2011
$1.7M
Novel epigenetic paradigm in endometrial cancer recurrenceR01CA172279 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI HUANG, TIM H.-M. · 2014 to 2018
$1.5M
NCATS NIH HHS UL1 TR001120NCI NIH HHS P30 CA054174NCI NIH HHS P30CA054174NCI NIH HHS P50 CA134254NCI NIH HHS R01 CA172279NCI NIH HHS U54 CA113001NCI NIH HHS U54CA113001
6 · The paper itself

Abstract

purposeEpigenetic regulation by promoter methylation plays a key role in tumorigenesis. Our goal was to investigate whether altered DNA methylation signatures associated with oncogenic signaling delineate biomarkers predictive of endometrial cancer recurrence. EXPERIMENTAL

designMethyl-CpG-capture sequencing was used for global screening of aberrant DNA methylation in our endometrial cancer cohort, followed by validation in an independent The Cancer Genome Atlas (TCGA) cohort. Bioinformatics as well as functional analyses in vitro, using RNA interference (RNAi) knockdown, were performed to examine regulatory mechanisms of candidate gene expression and contribution to aggressive phenotype, such as epithelial-mesenchymal transition (EMT).

resultsWe identified 2,302 hypermethylated loci in endometrial tumors compared with control samples. Bone morphogenetic protein (BMP) family genes, including BMP1, 2, 3, 4, and 7, were among the frequently hypermethylated loci. Interestingly, BMP2, 3, 4, and 7 were less methylated in primary tumors with subsequent recurrence and in patients with shorter disease-free interval compared with nonrecurrent tumors, which was validated and associated with poor survival in the TCGA cohort (BMP4, P = 0.009; BMP7, P = 0.007). Stimulation of endometrial cancer cells with epidermal growth factor (EGF) induced EMT and transcriptional activation of these genes, which was mediated by the epithelial cell adhesion molecule (EpCAM). EGF signaling was implicated in maintaining the promoters of candidate BMP genes in an active chromatin configuration and thus subject to transcriptional activation.

conclusionsHypomethylation signatures of candidate BMP genes associated with EpCAM-mediated expression present putative biomarkers predictive of poor survival in endometrial cancer.

Indexed as

DNA MethylationAntigens, NeoplasmBase SequenceBone Morphogenetic ProteinsCell Adhesion MoleculesCell Line, TumorCpG IslandsDisease-Free SurvivalEndometrial NeoplasmsEpidermal Growth FactorEpithelial Cell Adhesion MoleculeEpithelial-Mesenchymal TransitionFemaleHumansNeoplasm Recurrence, LocalPromoter Regions, GeneticAntigens, NeoplasmBone Morphogenetic ProteinsCell Adhesion MoleculesEPCAM protein, humanEpidermal Growth FactorEpithelial Cell Adhesion MoleculeRNA, Small Interfering

Identifiers

PMID24077349
PMCPMC4080631
OpenAlexW2146404065

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.