Evidence map›Paper›PMID 24076411›Full record

ArticleExperimental eye research2013

Hypoxia-induced expression of VEGF splice variants and protein in four retinal cell types.

William M Watkins, Gary W McCollum, Sara R Savage, Megan E Capozzi, John S Penn, David G Morrison

Abstract readComparative Study
In one paragraph

Article in Experimental eye research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Effects of an Aquaporin 4 Inhibitor, TGN-020, on Murine Diabetic Retina.International journal of molecular sciences · 2020
    Article
  11. Article
  12. Article
  13. Mitigation of oxygen-induced retinopathy in α2β1 integrin-deficient mice.Investigative ophthalmology & visual science · 2014
    Article
  14. The role of cytochrome P450 epoxygenases in retinal angiogenesis.Investigative ophthalmology & visual science · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

William M WatkinsDepartment of Ophthalmology and Visual Sciences, Vanderbilt University School of Medicine, 8009 Medical Center East, 1215 21st Avenue South, Nashville, TN 37232-8808, USA.
Gary W McCollum
Sara R Savage
Megan E Capozzi
John S Penn
David G Morrison

Funding

Shop Module CoreP30EY008126 · NEI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Kevin L Schey · 1989 to 2026
$19.6M
RETINOPATHY OF PREMATURITY--UNDERSTAND ITS PATHOGENESISR01EY007533 · NEI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI PENN, JOHN S. · 1993 to 2018
$7.0M
ANIMAL MODEL FOR RETINOPATHY OF PREMATURITYR29EY007533 · NEI · UNIVERSITY OF ARKANSAS MED SCIS LTL ROCK · PI PENN, JOHN S. · 1988 to 1992
–
NEI NIH HHS EY07533NEI NIH HHS P30-EY008126NEI NIH HHS R01 EY007533
6 · The paper itself

Abstract

The purpose of this study was to investigate the hypoxia-induced Vegf120, Vegf164 and Vegf188 mRNA expression profiles in rat Müller cells (MC), astrocytes, retinal pigmented epithelial cells (RPE) and retinal microvascular endothelial cells (RMEC) and correlate these findings to VEGF secreted protein. Cultured cells were exposed to normoxia or hypoxia. Total RNA was isolated from cell lysates and Vegf splice variant mRNA copy numbers were assayed by a validated qRT-PCR external calibration curve method. mRNA copy numbers were normalized to input total RNA. Conditioned medium was collected from cells and assayed for total VEGF protein by ELISA. Hypoxia increased total Vegf mRNA and secreted protein in all the retinal cell types, with the highest levels observed in MC and astrocytes ranking second. Total Vegf mRNA levels in hypoxic RPE and RMEC were comparable; however, the greatest hypoxic induction of each Vegf splice variant mRNA was observed in RMEC. RPE and RMEC ranked 3rd and 4th respectively, in terms of secreted total VEGF protein in hypoxia. The Vegf120, Vegf164 and Vegf188 mRNA splice variants were all increased in hypoxic cells compared to normoxic controls. In normoxia, the relative Vegf splice variant mRNA levels ranked from highest to lowest for each cell type were Vegf164 > Vegf120 > Vegf188. Hypoxic induction did not alter this ranking, although it did favor an increased stoichiometry of Vegf164 mRNA over the other two splice variants. MC and astrocytes are likely to be the major sources of total Vegf, Vegf164 splice variant mRNAs, and VEGF protein in retinal hypoxia.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsAnimals, NewbornCells, CulturedDisease Models, AnimalEnzyme-Linked Immunosorbent AssayHypoxiaProtein IsoformsRatsRats, Long-EvansReal-Time Polymerase Chain ReactionRetinaRetinal DiseasesRNA, MessengerVascular Endothelial Growth Factor AProtein IsoformsRNA, MessengerVascular Endothelial Growth Factor Ahypoxiasplice variantsvascular endothelial growth factor

Identifiers

PMID24076411
PMCPMC4256053

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.