Evidence map›Paper›PMID 24075919›Full record

ArticleVaccine2013

Genetic variants within the MHC region are associated with immune responsiveness to childhood vaccinations.

Berran Yucesoy, Yerkebulan Talzhanov, Victor J Johnson, Nevin W Wilson, Raymond E Biagini, Wei Wang, Bonnie Frye, David N Weissman, Dori R Germolec, Michael I Luster and 1 more

Abstract read
In one paragraph

Article in Vaccine, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 61 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Trial
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Frontiers in medicine · 2022
    Article
  11. Review
  12. Article
  13. Immunological Considerations forFrontiers in immunology · 2021
    Review
  14. Genetic-Code-Expansion Strategies for Vaccine Development.Chembiochem : a European journal of chemical biology · 2020
    Review
  15. Single Nucleotide Polymorphisms in IFN-The Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2020
    Article
  16. Current Challenges in Vaccinology.Frontiers in immunology · 2020
    Review
  17. Article
  18. Frontiers in immunology · 2019
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Berran YucesoyToxicology and Molecular Biology Branch, CDC/NIOSH, Morgantown, WV, USA. Electronic address: byucesoy@cdc.gov.
Yerkebulan Talzhanov
Victor J Johnson
Nevin W Wilson
Raymond E Biagini
Wei Wang
Bonnie Frye
David N Weissman
Dori R Germolec
Michael I Luster
Michael M Barmada
National Institute for Occupational Safety and Health · USUniversity of Pittsburgh · USResearch Triangle Park Foundation · USUniversity of Nevada, Reno · USWest Virginia University · US

Funding

Research and testing activities for the National Toxicology Program (NTP)ZIAES103227 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI TICE, RAYMOND · 2014 to 2014
$514k
Intramural CDC HHS CC999999Intramural NIH HHSNIEHS NIH HHS Y01 ES000001NIEHS NIH HHS Y1-ES-0001
6 · The paper itself

Abstract

The influence of genetic variability within the major histocompatibility complex (MHC) region on variations in immune responses to childhood vaccination was investigated. The study group consisted of 135 healthy infants who had been immunized with hepatitis B (HBV), 7-valent pneumococcal conjugate (PCV7), and diphtheria, tetanus, acellular pertussis (DTaP) vaccines according to standard childhood immunization schedules. Genotype analysis was performed on genomic DNA using Illumina Goldengate MHC panels (Mapping and Exon Centric). At the 1 year post vaccination check-up total, isotypic, and antigen-specific serum antibody levels were measured using multiplex immunoassays. A number of single nucleotide polymorphisms (SNPs) within MHC Class I and II genes were found to be associated with variations in the vaccine specific antibody responses and serum levels of immunoglobulins (IgG, IgM) and IgG isotypes (IgG1, IgG4) (all at p<0.001). Linkage disequilibrium patterns and functional annotations showed that significant SNPs were strongly correlated with other functional regulatory SNPs. These SNPs were found to regulate the expression of a group of genes involved in antigen processing and presentation including HLA-A, HLA-C, HLA-G, HLA-H, HLA-DRA, HLA-DRB1, HLA-DRB5, HLA-DQA1, HLA-DQB1, HLA-DOB, and TAP-2. The results suggest that genetic variations within particular MHC genes can influence immune response to common childhood vaccinations, which in turn may influence vaccine efficacy.

Indexed as

Major Histocompatibility ComplexPolymorphism, Single NucleotideAntibodies, BacterialDiphtheria-Tetanus-acellular Pertussis VaccinesFemaleHepatitis B AntibodiesHepatitis B VaccinesHeptavalent Pneumococcal Conjugate VaccineHumansInfantMalePneumococcal VaccinesAntibodies, BacterialDiphtheria-Tetanus-acellular Pertussis VaccinesHepatitis B AntibodiesHepatitis B VaccinesHeptavalent Pneumococcal Conjugate VaccinePneumococcal VaccinesChildhood vaccineCPSdiphtheria, tetanus, and pertussisDTaPGenetic polymorphismhaemophilus influenza type bHBsAgHBVhepatitis B virusheptavalent pneumococcal conjugateHibHLAhuman leukocyte antigenIgImmune responseimmunoglobulininactivated polio vaccineIPVLDlinkage disequilibriummajor histocompatibility complexMajor histocompatibility complexMHCodds ratioORPCV7pneumococcal cell wall polysaccharidepneumococcal polysaccharidesPnPSsingle nucleotide polymorphismSNPsurface antigen of hepatitis B virus

Identifiers

PMID24075919
PMCPMC4640212
OpenAlexW2087911770

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.